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  5. MA_131g0010

MA_131g0010


Description : Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana (sp|q9sy02|pp301_arath : 620.0)


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_131g0010
Cluster HCCA: Cluster_172

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00103p00160020 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein DOT4,... 0.03 OrthoFinder output from all 47 species
AT1G06140 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.05 OrthoFinder output from all 47 species
AT1G13410 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.06 OrthoFinder output from all 47 species
AT1G17630 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.04 OrthoFinder output from all 47 species
AT1G56570 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 OrthoFinder output from all 47 species
AT2G13600 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
AT2G41080 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 OrthoFinder output from all 47 species
AT2G44880 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.05 OrthoFinder output from all 47 species
AT3G03580 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.05 OrthoFinder output from all 47 species
AT3G13770 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.06 OrthoFinder output from all 47 species
AT3G15130 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 OrthoFinder output from all 47 species
AT3G23330 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G26540 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 OrthoFinder output from all 47 species
AT4G02750 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G14820 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.05 OrthoFinder output from all 47 species
AT4G35130 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G39952 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.05 OrthoFinder output from all 47 species
AT5G16860 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g002829 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g014833 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g035632 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g053801 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g055824 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g095327 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g03860 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27290 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0069.g036580 No alias not classified & original description: CDS=1-1665 0.04 OrthoFinder output from all 47 species
Dac_g44035 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g20608 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g33764 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01000072001 No alias Pentatricopeptide repeat-containing protein At3g05340... 0.05 OrthoFinder output from all 47 species
GSVIVT01003422001 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.08 OrthoFinder output from all 47 species
GSVIVT01007974001 No alias Pentatricopeptide repeat-containing protein At5g61400... 0.04 OrthoFinder output from all 47 species
GSVIVT01010647001 SLO1 Pentatricopeptide repeat-containing protein At2g22410,... 0.06 OrthoFinder output from all 47 species
GSVIVT01012174001 No alias Pentatricopeptide repeat-containing protein At2g03380,... 0.04 OrthoFinder output from all 47 species
GSVIVT01016874001 OTP82 Pentatricopeptide repeat-containing protein At1g08070,... 0.06 OrthoFinder output from all 47 species
GSVIVT01017989001 LOI1, MEF11 RNA processing.organelle machineries.RNA... 0.04 OrthoFinder output from all 47 species
GSVIVT01024588001 OTP82 Pentatricopeptide repeat-containing protein At1g08070,... 0.06 OrthoFinder output from all 47 species
GSVIVT01030054001 LPA66 Pentatricopeptide repeat-containing protein At5g48910... 0.03 OrthoFinder output from all 47 species
GSVIVT01031265001 LPA66 Pentatricopeptide repeat-containing protein At5g66520... 0.05 OrthoFinder output from all 47 species
GSVIVT01033863001 No alias RNA processing.organelle machineries.RNA... 0.04 OrthoFinder output from all 47 species
GSVIVT01036757001 OTP84 Pentatricopeptide repeat-containing protein At1g20230... 0.04 OrthoFinder output from all 47 species
Gb_00930 CRR22 Pentatricopeptide repeat-containing protein At2g22070... 0.03 OrthoFinder output from all 47 species
Gb_02194 REME1 Pentatricopeptide repeat-containing protein At1g11290,... 0.07 OrthoFinder output from all 47 species
Gb_02603 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.03 OrthoFinder output from all 47 species
Gb_02998 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.03 OrthoFinder output from all 47 species
Gb_03512 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.05 OrthoFinder output from all 47 species
Gb_03631 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.05 OrthoFinder output from all 47 species
Gb_04079 OTP84 RNA editing factor (MEF19) 0.04 OrthoFinder output from all 47 species
Gb_04091 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
Gb_04381 No alias Pentatricopeptide repeat-containing protein DOT4,... 0.03 OrthoFinder output from all 47 species
Gb_04785 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.05 OrthoFinder output from all 47 species
Gb_05647 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.05 OrthoFinder output from all 47 species
Gb_05648 No alias Pentatricopeptide repeat-containing protein At5g16860... 0.03 OrthoFinder output from all 47 species
Gb_06899 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
Gb_07442 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.04 OrthoFinder output from all 47 species
Gb_07723 OTP84 RNA editing factor (OTP82) 0.06 OrthoFinder output from all 47 species
Gb_07730 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.04 OrthoFinder output from all 47 species
Gb_07872 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
Gb_08051 DOT4 Pentatricopeptide repeat-containing protein At5g16860... 0.04 OrthoFinder output from all 47 species
Gb_08053 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.03 OrthoFinder output from all 47 species
Gb_08618 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
Gb_08968 CRR2 Pentatricopeptide repeat-containing protein At4g02750... 0.08 OrthoFinder output from all 47 species
Gb_09654 No alias RNA editing factor (MEF13) 0.03 OrthoFinder output from all 47 species
Gb_10133 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
Gb_10151 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.03 OrthoFinder output from all 47 species
Gb_10158 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
Gb_10270 No alias RNA editing factor (MEF8). RNA editing factor (BLX) 0.05 OrthoFinder output from all 47 species
Gb_10922 VAC1, ECB2, ATECB2 Pentatricopeptide repeat-containing protein At3g09040,... 0.03 OrthoFinder output from all 47 species
Gb_10985 OTP84 Pentatricopeptide repeat-containing protein At2g22070... 0.05 OrthoFinder output from all 47 species
Gb_13369 No alias RNA editing factor (MEF12) 0.04 OrthoFinder output from all 47 species
Gb_13717 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
Gb_15643 CRR22 Pentatricopeptide repeat-containing protein At4g02750... 0.05 OrthoFinder output from all 47 species
Gb_15666 No alias Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Gb_16828 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.06 OrthoFinder output from all 47 species
Gb_16898 No alias Pentatricopeptide repeat-containing protein At3g24000,... 0.03 OrthoFinder output from all 47 species
Gb_18436 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.03 OrthoFinder output from all 47 species
Gb_18600 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.03 OrthoFinder output from all 47 species
Gb_21047 CRR22 Pentatricopeptide repeat-containing protein DOT4,... 0.03 OrthoFinder output from all 47 species
Gb_21064 CRR22 RNA editing factor (OTP82) 0.03 OrthoFinder output from all 47 species
Gb_21442 CRR22 Pentatricopeptide repeat-containing protein At3g12770... 0.06 OrthoFinder output from all 47 species
Gb_22613 CRR22 Pentatricopeptide repeat-containing protein At2g27610... 0.04 OrthoFinder output from all 47 species
Gb_22740 VAC1, ECB2, ATECB2 Pentatricopeptide repeat-containing protein At1g15510,... 0.03 OrthoFinder output from all 47 species
Gb_22769 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
Gb_23671 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
Gb_23798 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.04 OrthoFinder output from all 47 species
Gb_23924 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
Gb_23934 OTP84 Pentatricopeptide repeat-containing protein At3g12770... 0.06 OrthoFinder output from all 47 species
Gb_24030 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.06 OrthoFinder output from all 47 species
Gb_24515 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.03 OrthoFinder output from all 47 species
Gb_24674 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.04 OrthoFinder output from all 47 species
Gb_24755 CRR22 RNA editing factor (MEF19). RNA editing factor (OTP82) 0.05 OrthoFinder output from all 47 species
Gb_25737 MEF1 RNA editing factor (MEF1) 0.04 OrthoFinder output from all 47 species
Gb_26689 CRR22 Pentatricopeptide repeat-containing protein At3g12770... 0.03 OrthoFinder output from all 47 species
Gb_26723 OTP84 Pentatricopeptide repeat-containing protein At2g22070... 0.06 OrthoFinder output from all 47 species
Gb_27833 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.06 OrthoFinder output from all 47 species
Gb_27879 VAC1, ECB2, ATECB2 RNA editing factor (ECB2/VAC1) 0.03 OrthoFinder output from all 47 species
Gb_28612 LOI1, MEF11 RNA editing factor (MEF11) 0.06 OrthoFinder output from all 47 species
Gb_28762 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
Gb_28780 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.05 OrthoFinder output from all 47 species
Gb_29028 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.05 OrthoFinder output from all 47 species
Gb_29543 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
Gb_29872 CRR22 RNA editing factor (MEF19). RNA editing factor (OTP82) 0.03 OrthoFinder output from all 47 species
Gb_29877 CRR22 RNA editing factor (OTP82) 0.05 OrthoFinder output from all 47 species
Gb_29879 CRR22 RNA editing factor (MEF19). RNA editing factor (OTP82) 0.03 OrthoFinder output from all 47 species
Gb_29881 OTP86 Pentatricopeptide repeat-containing protein At4g21300... 0.04 OrthoFinder output from all 47 species
Gb_29990 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.07 OrthoFinder output from all 47 species
Gb_31162 REME1 Pentatricopeptide repeat-containing protein At1g11290,... 0.06 OrthoFinder output from all 47 species
Gb_31457 EMB2261 RNA editing factor (BLX) 0.03 OrthoFinder output from all 47 species
Gb_31706 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
Gb_31795 CRR22 Pentatricopeptide repeat-containing protein At2g13600... 0.06 OrthoFinder output from all 47 species
Gb_32051 REME1 Pentatricopeptide repeat-containing protein At4g02750... 0.05 OrthoFinder output from all 47 species
Gb_32448 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
Gb_32455 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.04 OrthoFinder output from all 47 species
Gb_33111 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.07 OrthoFinder output from all 47 species
Gb_33136 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
Gb_33367 No alias RNA editing factor (OTP82) 0.05 OrthoFinder output from all 47 species
Gb_35599 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.06 OrthoFinder output from all 47 species
Gb_35786 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.04 OrthoFinder output from all 47 species
Gb_38897 DOT4 Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
Gb_41753 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
Gb_41804 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
LOC_Os02g09800.1 OTP82, LOC_Os02g09800 Pentatricopeptide repeat-containing protein At1g08070,... 0.07 OrthoFinder output from all 47 species
LOC_Os04g41120.1 LOC_Os04g41120 Pentatricopeptide repeat-containing protein At4g38010... 0.04 OrthoFinder output from all 47 species
Msp_g02461 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g04397 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g11635 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g13731 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g15422 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g16806 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g17026 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g17737 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g19069 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g23140 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g23181 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g28213 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g28538 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g33344 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g35356 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g37727 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g41108 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g46079 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g43350 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g14835 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g39360 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g13547 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g24764 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g48312 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g19341 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e001038_P001 CRR2, Zm00001e001038 Pentatricopeptide repeat-containing protein At1g08070,... 0.06 OrthoFinder output from all 47 species
Zm00001e007597_P001 Zm00001e007597 Pentatricopeptide repeat-containing protein At3g09040,... 0.03 OrthoFinder output from all 47 species
Zm00001e010182_P001 Zm00001e010182 Pentatricopeptide repeat-containing protein At2g36980,... 0.04 OrthoFinder output from all 47 species
Zm00001e011923_P001 Zm00001e011923 Pentatricopeptide repeat-containing protein At4g21300... 0.03 OrthoFinder output from all 47 species
Zm00001e030553_P001 Zm00001e030553 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 299 328
IPR002885 Pentatricopeptide_repeat 102 135
IPR002885 Pentatricopeptide_repeat 138 186
IPR002885 Pentatricopeptide_repeat 331 379
IPR002885 Pentatricopeptide_repeat 433 481
IPR002885 Pentatricopeptide_repeat 508 531
IPR002885 Pentatricopeptide_repeat 241 266
IPR002885 Pentatricopeptide_repeat 407 432
IPR002885 Pentatricopeptide_repeat 215 239
IPR002885 Pentatricopeptide_repeat 272 298
IPR032867 DYW_dom 606 730
No external refs found!