ChrUn.fgenesh.mRNA.26

Description : Disease resistance protein RPM1 OS=Arabidopsis thaliana (sp|q39214|rpm1_arath : 366.0)

Gene families : OG_01_0000088 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000088_tree ,
OG_02_0000027 (LandPlants) Phylogenetic Tree(s): OG_02_0000027_tree ,
OG_03_0000027 (SeedPlants) Phylogenetic Tree(s): OG_03_0000027_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: ChrUn.fgenesh.mRNA.26
Cluster	HCCA: Cluster_131

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00006p00263820	evm_27.TU.AmTr_v1...	Disease resistance protein RPM1 OS=Arabidopsis thaliana	0.03	Archaeplastida
AMTR_s00061p00152710	evm_27.TU.AmTr_v1...	Disease resistance protein RPM1 OS=Arabidopsis thaliana	0.03	Archaeplastida
GSVIVT01032826001	No alias	Disease resistance RPP8-like protein 3 OS=Arabidopsis thaliana	0.03	Archaeplastida
LOC_Os10g21400.1	No alias	Disease resistance protein RPM1 OS=Arabidopsis thaliana...	0.04	Archaeplastida
MA_423032g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
AMTR_s00006p00263820	evm_27.TU.AmTr_v1...	Disease resistance protein RPM1 OS=Arabidopsis thaliana	0.03	LandPlants
AMTR_s00061p00111070	evm_27.TU.AmTr_v1...	Putative disease resistance protein At1g59780...	0.02	LandPlants
AMTR_s00088p00054890	evm_27.TU.AmTr_v1...	No description available	0.02	LandPlants
AT1G58410	No alias	Disease resistance protein (CC-NBS-LRR class) family	0.02	LandPlants
GSVIVT01024100001	No alias	Putative disease resistance protein At1g50180...	0.03	LandPlants
GSVIVT01032826001	No alias	Disease resistance RPP8-like protein 3 OS=Arabidopsis thaliana	0.03	LandPlants
Gb_10846	No alias	Probable disease resistance protein At1g61180...	0.02	LandPlants
LOC_Os10g21400.1	No alias	Disease resistance protein RPM1 OS=Arabidopsis thaliana...	0.04	LandPlants
AMTR_s00061p00165330	evm_27.TU.AmTr_v1...	Disease resistance protein RPP13 OS=Arabidopsis thaliana	0.02	SeedPlants
AT1G58807	No alias	Disease resistance protein (CC-NBS-LRR class) family	0.02	SeedPlants
AT1G59124	No alias	Disease resistance protein (CC-NBS-LRR class) family	0.02	SeedPlants
AT3G46530	RPP13	NB-ARC domain-containing disease resistance protein	0.02	SeedPlants
GSVIVT01024100001	No alias	Putative disease resistance protein At1g50180...	0.03	SeedPlants
LOC_Os10g21400.1	No alias	Disease resistance protein RPM1 OS=Arabidopsis thaliana...	0.04	SeedPlants

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043531	ADP binding	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR041118	Rx_N	27	99
IPR002182	NB-ARC	179	407

External Links

No external refs found!

ChrUn.fgenesh.mRNA.26

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation