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  5. ChrSy.fgenesh.mRNA.62

ChrSy.fgenesh.mRNA.62


Description : RNA-directed DNA polymerase homolog OS=Oenothera berteroana (sp|p31843|rrpo_oenbe : 82.0)


Gene families : OG_01_0000001 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_02_0009090 (LandPlants) Phylogenetic Tree(s): OG_02_0009090_tree ,
OG_03_0008068 (SeedPlants) Phylogenetic Tree(s): OG_03_0008068_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: ChrSy.fgenesh.mRNA.62
Cluster HCCA: Cluster_270

Target Alias Description ECC score Gene Family Method Actions
ATMG00860 ORF158 DNA/RNA polymerases superfamily protein 0.04 Archaeplastida
ChrSy.fgenesh.mRNA.34 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.1 Archaeplastida
ChrSy.fgenesh.mRNA.40 No alias no hits & (original description: none) 0.09 Archaeplastida
ChrSy.fgenesh.mRNA.48 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.04 Archaeplastida
ChrSy.fgenesh.mRNA.60 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.04 Archaeplastida
ChrUn.fgenesh.mRNA.11 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.07 Archaeplastida
ChrUn.fgenesh.mRNA.53 No alias no hits & (original description: none) 0.05 Archaeplastida
ChrUn.fgenesh.mRNA.7 No alias no hits & (original description: none) 0.06 Archaeplastida
ChrUn.fgenesh.mRNA.82 No alias no hits & (original description: none) 0.07 Archaeplastida
Cpa|evm.model.tig00000788.14 No alias Uncharacterized mitochondrial protein AtMg00860... 0.01 Archaeplastida
Gb_00235 No alias Uncharacterized mitochondrial protein AtMg00860... 0.04 Archaeplastida
Gb_06149 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.04 Archaeplastida
Gb_12881 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.05 Archaeplastida
Gb_14507 No alias no hits & (original description: none) 0.03 Archaeplastida
Gb_18576 No alias no hits & (original description: none) 0.03 Archaeplastida
Gb_23550 No alias no hits & (original description: none) 0.04 Archaeplastida
Gb_25344 No alias Uncharacterized mitochondrial protein AtMg00860... 0.05 Archaeplastida
Gb_27104 No alias no hits & (original description: none) 0.06 Archaeplastida
Gb_30086 No alias no hits & (original description: none) 0.03 Archaeplastida
Gb_35936 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.05 Archaeplastida
LOC_Os08g05250.1 No alias no hits & (original description: none) 0.06 Archaeplastida
ChrUn.fgenesh.mRNA.11 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.07 LandPlants
ChrUn.fgenesh.mRNA.11 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.07 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000477 RT_dom 858 944
IPR005162 Retrotrans_gag_dom 275 365
No external refs found!