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  5. MA_12518g0010

MA_12518g0010 (EMB2453, ATPPR5)


Aliases : EMB2453, ATPPR5

Description : Pentatricopeptide repeat-containing protein PPR5 homolog, chloroplastic OS=Oryza sativa subsp. japonica (sp|a3abe1|ppr5_orysj : 497.0)


Gene families : OG0002119 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002119_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_12518g0010
Cluster HCCA: Cluster_88

Target Alias Description ECC score Gene Family Method Actions
AT5G48730 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
Ceric.1Z174800.1 Ceric.1Z174800 not classified & original description: pacid=50628243... 0.06 OrthoFinder output from all 47 species
Gb_00230 No alias Pentatricopeptide repeat-containing protein At3g06430,... 0.03 OrthoFinder output from all 47 species
Gb_36199 EMB2453, ATPPR5 Pentatricopeptide repeat-containing protein At4g39620,... 0.02 OrthoFinder output from all 47 species
Gb_37344 No alias Pentatricopeptide repeat-containing protein At5g48730,... 0.03 OrthoFinder output from all 47 species
Gb_38049 No alias Pentatricopeptide repeat-containing protein At3g53170... 0.05 OrthoFinder output from all 47 species
LOC_Os03g02430.1 LOC_Os03g02430 Pentatricopeptide repeat-containing protein At3g53170... 0.04 OrthoFinder output from all 47 species
LOC_Os06g07550.1 LOC_Os06g07550 Pentatricopeptide repeat-containing protein At5g48730,... 0.04 OrthoFinder output from all 47 species
Ore_g09304 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g30371 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc04g054270.4.1 EMB2453, ATPPR5,... Pentatricopeptide repeat-containing protein PPR5... 0.02 OrthoFinder output from all 47 species
Solyc12g098990.2.1 EMB2750, Solyc12g098990 Pentatricopeptide repeat-containing protein At3g06430,... 0.03 OrthoFinder output from all 47 species
Spa_g12418 EMB2453, ATPPR5 not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 177 230
IPR002885 Pentatricopeptide_repeat 326 369
IPR002885 Pentatricopeptide_repeat 146 175
IPR002885 Pentatricopeptide_repeat 396 424
IPR002885 Pentatricopeptide_repeat 241 301
No external refs found!