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  5. MA_125121g0010

MA_125121g0010 (PEP, PAS2)


Aliases : PEP, PAS2

Description : Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase PASTICCINO 2 OS=Arabidopsis thaliana (sp|q8vzb2|hacd_arath : 153.0)


Gene families : OG0003739 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003739_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_125121g0010
Cluster HCCA: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
AT5G10480 PEP, PAS2 Protein-tyrosine phosphatase-like, PTPLA 0.11 OrthoFinder output from all 47 species
Ala_g00791 PEP, PAS2 3-hydroxyacyl-CoA dehydratase *(HCD) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g07670 PEP, PAS2 3-hydroxyacyl-CoA dehydratase *(HCD) & original description: none 0.07 OrthoFinder output from all 47 species
Aspi01Gene36619.t1 PEP, PAS2,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cre03.g167924 PEP, PAS2 Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase... 0.01 OrthoFinder output from all 47 species
Dac_g04065 PEP, PAS2 3-hydroxyacyl-CoA dehydratase *(HCD) & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g49726 PEP, PAS2 3-hydroxyacyl-CoA dehydratase *(HCD) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g00553 PEP, PAS2 3-hydroxyacyl-CoA dehydratase *(HCD) & original description: none 0.08 OrthoFinder output from all 47 species
GSVIVT01005931001 PEP, PAS2 Lipid metabolism.fatty acid synthesis.fatty acid... 0.04 OrthoFinder output from all 47 species
Gb_04514 PEP, PAS2 3-hydroxyacyl-CoA dehydratase (HCD) 0.07 OrthoFinder output from all 47 species
LOC_Os01g05744.1 PEP, PAS2, LOC_Os01g05744 3-hydroxyacyl-CoA dehydratase (HCD) 0.04 OrthoFinder output from all 47 species
Len_g28301 PEP, PAS2 3-hydroxyacyl-CoA dehydratase *(HCD) & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g29715 PEP, PAS2 3-hydroxyacyl-CoA dehydratase *(HCD) & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g01832 PEP, PAS2 3-hydroxyacyl-CoA dehydratase *(HCD) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g00260 PEP, PAS2 3-hydroxyacyl-CoA dehydratase *(HCD) & original description: none 0.08 OrthoFinder output from all 47 species
Ore_g09139 PEP, PAS2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g09140 PEP, PAS2 3-hydroxyacyl-CoA dehydratase *(HCD) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g11604 PEP, PAS2 3-hydroxyacyl-CoA dehydratase *(HCD) & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g16754 No alias 3-hydroxyacyl-CoA dehydratase *(HCD) & original description: none 0.04 OrthoFinder output from all 47 species
Solyc04g014370.4.1 PEP, PAS2, Solyc04g014370 3-hydroxyacyl-CoA dehydratase (HCD) 0.09 OrthoFinder output from all 47 species
Solyc11g010590.3.1 PEP, PAS2, Solyc11g010590 Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase... 0.05 OrthoFinder output from all 47 species
Spa_g00613 PEP, PAS2 3-hydroxyacyl-CoA dehydratase *(HCD) & original description: none 0.12 OrthoFinder output from all 47 species
Zm00001e025807_P001 PEP, PAS2, Zm00001e025807 3-hydroxyacyl-CoA dehydratase (HCD) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR007482 Tyr_Pase-like_PTPLA 55 117
No external refs found!