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  5. MA_12502g0010

MA_12502g0010


Description : Pentatricopeptide repeat-containing protein At3g24000, mitochondrial OS=Arabidopsis thaliana (sp|q9liq7|pp252_arath : 424.0)


Gene families : OG0011717 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0011717_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_12502g0010

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00251890 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g59600... 0.05 OrthoFinder output from all 47 species
Adi_g036760 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g080034 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene71334.t1 EMB2758, Aspi01Gene71334 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.16G078200.1 Ceric.16G078200 not classified & original description: pacid=50589543... 0.03 OrthoFinder output from all 47 species
Gb_10356 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.03 OrthoFinder output from all 47 species
Gb_19896 No alias Pentatricopeptide repeat-containing protein DOT4,... 0.04 OrthoFinder output from all 47 species
Len_g18011 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g44853 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g24892 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo20613 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.01 OrthoFinder output from all 47 species
Smo98546 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 130 155
IPR002885 Pentatricopeptide_repeat 229 253
IPR002885 Pentatricopeptide_repeat 254 301
IPR002885 Pentatricopeptide_repeat 156 202
IPR032867 DYW_dom 410 534
No external refs found!