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  5. MA_121410g0010

MA_121410g0010 (ASK1, ATSKP1, UIP1,...)


Aliases : ASK1, ATSKP1, UIP1, SKP1, SKP1A

Description : target protein binding component SKP1/ASK1 of SKP1-CUL1-FBX (SCF) E3 ligase complexes


Gene families : OG0000379 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000379_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_121410g0010

Target Alias Description ECC score Gene Family Method Actions
Cba_g08540 ASK1, ATSKP1,... ASK-type linker component of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
GSVIVT01021776001 ASK4, SK4 Protein degradation.peptide tagging.Ubiquitin... 0.05 OrthoFinder output from all 47 species
Gb_41410 ASK1, ATSKP1,... target protein binding component SKP1/ASK1 of... 0.08 OrthoFinder output from all 47 species
LOC_Os07g05150.1 ASK2, SKP1B,... target protein binding component SKP1/ASK1 of... 0.05 OrthoFinder output from all 47 species
LOC_Os07g05160.1 ASK4, SK4, LOC_Os07g05160 target protein binding component SKP1/ASK1 of... 0.07 OrthoFinder output from all 47 species
LOC_Os07g05180.1 ASK2, SKP1B,... target protein binding component SKP1/ASK1 of... 0.06 OrthoFinder output from all 47 species
LOC_Os07g43270.1 ASK1, ATSKP1,... target protein binding component SKP1/ASK1 of... 0.06 OrthoFinder output from all 47 species
LOC_Os08g28800.1 ASK1, ATSKP1,... target protein binding component SKP1/ASK1 of... 0.03 OrthoFinder output from all 47 species
LOC_Os08g28820.1 ASK1, ATSKP1,... target protein binding component SKP1/ASK1 of... 0.06 OrthoFinder output from all 47 species
LOC_Os09g10230.1 ASK4, SK4, LOC_Os09g10230 target protein binding component SKP1/ASK1 of... 0.04 OrthoFinder output from all 47 species
LOC_Os09g10270.1 ASK4, SK4, LOC_Os09g10270 target protein binding component SKP1/ASK1 of... 0.05 OrthoFinder output from all 47 species
Lfl_g39045 ASK2, SKP1B ASK-type linker component of SCF E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
Ppi_g09622 ASK2, SKP1B ASK-type linker component of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Ppi_g40477 ASK1, ATSKP1,... ASK-type linker component of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Zm00001e020534_P002 ASK2, SKP1B,... target protein binding component SKP1/ASK1 of... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006511 ubiquitin-dependent protein catabolic process IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR016072 Skp1_comp_dimer 115 162
IPR016073 Skp1_comp_POZ 15 73
No external refs found!