LOC_Os06g23650 (Os06g0344900)


Aliases : Os06g0344900

Description : 33.99 development.unspecified Transcriptional activator of the NAC gene family, with CUC1 redundantly required for embryonic apical meristem formation, cotyledon separation and expression of STM. Proper timing of CUC2 expression is required to maintain the phyllotactic pattern initiated in the meristem. CUC2 expression in leaf sinus region is required for serration and the extent of serration is modulated by mir164A mediated repression of CUC2. CUP-SHAPED COTYLEDON 2 (CUC2)


Gene families : OG_01_0000027 (Gene family) Phylogenetic Tree(s): OG0000027_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os06g23650
Cluster HCCA cluster: Cluster_47

Target Alias Description ECC score Gene Family Method Actions
AT1G76420 ANAC031, NAC368, CUC3 NAC (No Apical Meristem) domain transcriptional... 0.07 Gene family
AT2G18060 VND1, ANAC037 vascular related NAC-domain protein 1 0.03 Gene family
AT3G15170 ANAC054, ATNAC1, CUC1 NAC (No Apical Meristem) domain transcriptional... 0.02 Gene family
AT5G53950 ATCUC2, ANAC098, CUC2 NAC (No Apical Meristem) domain transcriptional... 0.06 Gene family
GSVIVT01001264001 No alias 33.99 development.unspecified Encodes a NAC-domain... 0.05 Gene family
GSVIVT01013419001 No alias 33.99 development.unspecified Identified in an enhancer... 0.06 Gene family
GSVIVT01014287001 No alias 33.99 development.unspecified Transcriptional activator... 0.02 Gene family
GSVIVT01018623001 No alias 33.99 development.unspecified Encodes a NAC-domain... 0.03 Gene family
GSVIVT01027431001 No alias 33.99 development.unspecified NAC transcription factor... 0.02 Gene family
GSVIVT01033374001 No alias 33.99 development.unspecified Arabidopsis NAC domain... 0.02 Gene family
GSVIVT01034485001 No alias 33.99 development.unspecified Encodes a NAC-domain... 0.05 Gene family
LOC_Os02g15340 Os02g0252200 33.99 development.unspecified NAC-domain protein.... 0.02 Gene family
LOC_Os02g42970 Os02g0643600 33.99 development.unspecified Encodes a NAC-domain... 0.03 Gene family
LOC_Os06g04090 Os06g0131700 33.99 development.unspecified NAC transcription factor... 0.02 Gene family
LOC_Os06g33940 Os06g0530400 33.99 development.unspecified NAC-domain protein.... 0.02 Gene family
LOC_Os08g02300 Os08g0115800 33.99 development.unspecified NAC transcription factor... 0.02 Gene family
Smo71404 PACid_15423223 33.99 development.unspecified Encodes a NAC-domain... 0.02 Gene family
Solyc02g084345.1.1 Solyc02g084345.1 33.99 development.unspecified Encodes a NAC-domain... 0.03 Gene family
Solyc02g088180.3.1 Solyc02g088180.3 33.99 development.unspecified NAC domain containing... 0.02 Gene family
Solyc06g061080.3.1 Solyc06g061080.3 33.99 development.unspecified NAC domain containing... 0.02 Gene family
Solyc06g065410.3.1 Solyc06g065410.3 33.99 development.unspecified Encodes a NAC-domain... 0.04 Gene family
Solyc07g062840.3.1 Solyc07g062840.3 33.99 development.unspecified Transcriptional activator... 0.07 Gene family
Solyc11g018660.2.1 Solyc11g018660.2 33.99 development.unspecified Encodes a NAC-domain... 0.03 Gene family
Solyc12g017400.2.1 Solyc12g017400.2 33.99 development.unspecified NAC-domain protein.... 0.02 Gene family
Zm00001d002828 GRMZM2G178998 33.99 development.unspecified Encodes a NAC-domain... 0.03 Gene family
Zm00001d020982 GRMZM2G386163 33.99 development.unspecified Arabidopsis NAC domain... 0.03 Gene family
Zm00001d021424 No alias 33.99 development.unspecified NAC domain containing... 0.02 Gene family
Zm00001d031463 GRMZM2G430522 33.99 development.unspecified Identified in an enhancer... 0.08 Gene family
Zm00001d033308 No alias 33.99 development.unspecified NAC domain containing... 0.02 Gene family
Zm00001d034984 GRMZM2G052239 33.99 development.unspecified Encodes a NAC-domain... 0.03 Gene family
Zm00001d035266 GRMZM2G393433 33.99 development.unspecified Transcriptional activator... 0.05 Gene family
Zm00001d036050 GRMZM2G091490 33.99 development.unspecified Encodes SND1, a NAC Domain... 0.03 Gene family
Zm00001d041791 GRMZM2G139700 33.99 development.unspecified Transcriptional activator... 0.08 Gene family
Zm00001d049678 GRMZM2G069047 33.99 development.unspecified NAC transcription factor... 0.03 Gene family
Zm00001d050039 GRMZM2G048826 33.99 development.unspecified Encodes a NAC-domain... 0.04 Gene family
Zm00001d051294 GRMZM2G354151 33.99 development.unspecified Encodes a NAC-domain... 0.04 Gene family

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003441 NAC-dom 24 150
No external refs found!