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MA_1151g0010


Description : C3H zinc finger transcription factor


Gene families : OG0000799 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000799_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_1151g0010

Target Alias Description ECC score Gene Family Method Actions
Aev_g07786 No alias regulatory protein *(KHZ) of autonomous floral-promotion... 0.02 OrthoFinder output from all 47 species
Als_g10743 No alias regulatory protein *(KHZ) of autonomous floral-promotion... 0.03 OrthoFinder output from all 47 species
Als_g20784 No alias regulatory protein *(KHZ) of autonomous floral-promotion... 0.02 OrthoFinder output from all 47 species
Aop_g63082 No alias regulatory protein *(KHZ) of autonomous floral-promotion... 0.03 OrthoFinder output from all 47 species
Azfi_s0102.g044457 No alias regulatory protein *(KHZ) of autonomous floral-promotion... 0.03 OrthoFinder output from all 47 species
Dcu_g19603 No alias regulatory protein *(KHZ) of autonomous floral-promotion... 0.02 OrthoFinder output from all 47 species
GSVIVT01025360001 No alias RNA biosynthesis.transcriptional activation.C3H zinc... 0.04 OrthoFinder output from all 47 species
LOC_Os04g57010.1 LOC_Os04g57010 C3H zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Pnu_g11706 No alias regulatory protein *(KHZ) of autonomous floral-promotion... 0.02 OrthoFinder output from all 47 species
Ppi_g00907 No alias regulatory protein *(KHZ) of autonomous floral-promotion... 0.02 OrthoFinder output from all 47 species
Solyc10g080480.2.1 Solyc10g080480 C3H zinc finger transcription factor 0.04 OrthoFinder output from all 47 species
Zm00001e037586_P002 Zm00001e037586 C3H zinc finger transcription factor 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003697 single-stranded DNA binding IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
InterPro domains Description Start Stop
IPR000571 Znf_CCCH 245 269
IPR000571 Znf_CCCH 11 34
IPR000571 Znf_CCCH 79 105
IPR004088 KH_dom_type_1 162 225
No external refs found!