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  5. MA_114710g0010

MA_114710g0010


Description : transcription factor (bHLH)


Gene families : OG0000875 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000875_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_114710g0010
Cluster HCCA: Cluster_13

Target Alias Description ECC score Gene Family Method Actions
AT2G42870 PAR1, HLH1 phy rapidly regulated 1 0.04 OrthoFinder output from all 47 species
AT3G17100 No alias sequence-specific DNA binding transcription factors 0.03 OrthoFinder output from all 47 species
AT3G58850 HLH2, PAR2 phy rapidly regulated 2 0.03 OrthoFinder output from all 47 species
MA_136890g0010 No alias transcription factor (bHLH) 0.05 OrthoFinder output from all 47 species
MA_415650g0010 No alias transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
MA_884377g0010 No alias transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
MA_93585g0010 No alias transcription factor (bHLH) 0.05 OrthoFinder output from all 47 species
Solyc06g009510.1.1 UPB1, Solyc06g009510 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006576 biogenic amine metabolic process IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
BP GO:0009309 amine biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0030410 nicotianamine synthase activity IEP HCCA
BP GO:0030417 nicotianamine metabolic process IEP HCCA
BP GO:0030418 nicotianamine biosynthetic process IEP HCCA
BP GO:0042401 biogenic amine biosynthetic process IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
BP GO:0072350 tricarboxylic acid metabolic process IEP HCCA
BP GO:0072351 tricarboxylic acid biosynthetic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!