MA_11459g0010

Description : Putative multidrug resistance protein OS=Oryza sativa subsp. japonica (sp|q6yuu5|mdr_orysj : 353.0)

Gene families : OG0000048 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: MA_11459g0010

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00049p00128080	evm_27.TU.AmTr_v1...	Putative multidrug resistance protein OS=Oryza sativa...	0.03	OrthoFinder output from all 47 species
Aob_g16050	PGP2	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g19030	ABCB19,...	subfamily ABCB transporter & original description: none	0.01	OrthoFinder output from all 47 species
Aob_g22201	ABCB19,...	subfamily ABCB transporter & original description: none	0.01	OrthoFinder output from all 47 species
Aob_g33802	No alias	subfamily ABCB transporter & original description: none	0.01	OrthoFinder output from all 47 species
Aspi01Gene08453.t1	PGP11, Aspi01Gene08453	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene08469.t1	PGP11, Aspi01Gene08469	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene12320.t2	PGP2, Aspi01Gene12320	subfamily ABCB transporter & original description: none	0.01	OrthoFinder output from all 47 species
Aspi01Gene20594.t1	PGP20, Aspi01Gene20594	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene20595.t1	PGP20, Aspi01Gene20595	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene45621.t1	PGP11, Aspi01Gene45621	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene46501.t1	ABCB19,...	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Azfi_s0006.g010080	PGP2	subfamily ABCB transporter & original description: CDS=691-4485	0.02	OrthoFinder output from all 47 species
Cba_g75977	No alias	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.34G053700.1	PGP2, Ceric.34G053700	subfamily ABCB transporter & original description:...	0.01	OrthoFinder output from all 47 species
Dac_g07802	PGP11	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Dcu_g20229	PGP11	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Dde_g08514	ABCB19,...	subfamily ABCB transporter & original description: none	0.04	OrthoFinder output from all 47 species
Ehy_g02960	PGP13	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g23811	ABCB19,...	subfamily ABCB transporter & original description: none	0.01	OrthoFinder output from all 47 species
GSVIVT01009946001	ABCB14, ATABCB14, PGP14	Solute transport.primary active transport.ABC...	0.05	OrthoFinder output from all 47 species
LOC_Os01g34970.1	PGP11, LOC_Os01g34970	subfamily ABCB transporter	0.04	OrthoFinder output from all 47 species
LOC_Os01g50160.1	PGP11, LOC_Os01g50160	subfamily ABCB transporter	0.02	OrthoFinder output from all 47 species
LOC_Os02g09720.1	LOC_Os02g09720	subfamily ABCB transporter	0.02	OrthoFinder output from all 47 species
MA_178534g0010	PGP2	ABC transporter B family member 2 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Ppi_g54716	PGP3, MDR3	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0015.g006646	PGP20	subfamily ABCB transporter & original description: CDS=24-3872	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0125.g021690	ABCB19,...	not classified & original description: CDS=77-2374	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0809.g027741	PGP20	subfamily ABCB transporter & original description: CDS=203-3700	0.01	OrthoFinder output from all 47 species
Sam_g24632	No alias	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Smo123936	ATPGP4, PGP4, ABCB4, MDR4	Solute transport.primary active transport.ABC...	0.04	OrthoFinder output from all 47 species
Smo231714	No alias	Solute transport.primary active transport.ABC...	0.01	OrthoFinder output from all 47 species
Smo233433	No alias	Solute transport.primary active transport.ABC...	0.02	OrthoFinder output from all 47 species
Solyc12g098840.3.1	PGP11, Solyc12g098840	subfamily ABCB transporter	0.01	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATP hydrolysis activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140657	ATP-dependent activity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR011527	ABC1_TM_dom	2	108
IPR003439	ABC_transporter-like_ATP-bd	186	277

External Links

No external refs found!

MA_11459g0010

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation