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  5. MA_114481g0010

MA_114481g0010


Description : La-related protein 1B OS=Arabidopsis thaliana (sp|q8rwr2|lrp1b_arath : 101.0)


Gene families : OG0000608 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000608_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_114481g0010

Target Alias Description ECC score Gene Family Method Actions
AT4G35890 No alias winged-helix DNA-binding transcription factor family protein 0.03 OrthoFinder output from all 47 species
Adi_g019211 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g020044 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g087231 No alias XRN4-exoribonuclease cofactor *(LARP1) & original... 0.03 OrthoFinder output from all 47 species
Adi_g107381 No alias XRN4-exoribonuclease cofactor *(LARP1) & original... 0.02 OrthoFinder output from all 47 species
Ala_g04484 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g26663 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g13843 No alias XRN4-exoribonuclease cofactor *(LARP1) & original... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000498.93 No alias No description available 0.01 OrthoFinder output from all 47 species
Cre10.g441200 No alias RNA processing.RNA decay.deadenylation-dependent... 0.01 OrthoFinder output from all 47 species
Dcu_g19632 No alias XRN4-exoribonuclease cofactor *(LARP1) & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01029892001 No alias RNA processing.RNA decay.deadenylation-dependent... 0.03 OrthoFinder output from all 47 species
Solyc02g061980.3.1 Solyc02g061980 La-related protein 1C OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Zm00001e000432_P002 Zm00001e000432 La-related protein 1B OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004619 phosphoglycerate mutase activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006006 glucose metabolic process IEP HCCA
BP GO:0006007 glucose catabolic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP HCCA
BP GO:0019318 hexose metabolic process IEP HCCA
BP GO:0019320 hexose catabolic process IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030145 manganese ion binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
BP GO:0046365 monosaccharide catabolic process IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
InterPro domains Description Start Stop
IPR006630 La_HTH 390 446
No external refs found!