MA_113300g0020

Description : E3 ubiquitin ligase (PUB)

Gene families : OG0000782 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000782_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: MA_113300g0020

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00041p00118190	evm_27.TU.AmTr_v1...	Protein degradation.peptide tagging.Ubiquitin...	0.03	OrthoFinder output from all 47 species
Aob_g07414	PUB44, SAUL1, ATPUB44	E3 ubiquitin ligase *(SAUL) & original description: none	0.04	OrthoFinder output from all 47 species
Aop_g09311	PUB44, SAUL1, ATPUB44	E3 ubiquitin ligase *(SAUL) & original description: none	0.02	OrthoFinder output from all 47 species
Azfi_s0054.g033811	No alias	E3 ubiquitin ligase *(SAUL) & original description: CDS=769-3783	0.02	OrthoFinder output from all 47 species
Ceric.09G008100.1	PUB44, SAUL1,...	E3 ubiquitin ligase *(SAUL) & original description:...	0.03	OrthoFinder output from all 47 species
MA_703456g0010	No alias	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species
Sacu_v1.1_s0015.g006708	No alias	E3 ubiquitin ligase *(SAUL) & original description: CDS=350-3358	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0058.g014934	PUB44, SAUL1, ATPUB44	E3 ubiquitin ligase *(SAUL) & original description: CDS=655-3684	0.06	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0016567	protein ubiquitination	IEA	Interproscan
MF	GO:0016740	transferase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003613	Ubox_domain	266	333

External Links

No external refs found!