MA_112272g0010


Description : Pentatricopeptide repeat-containing protein At5g39980, chloroplastic OS=Arabidopsis thaliana (sp|q9fld8|pp408_arath : 558.0)


Gene families : OG0008153 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008153_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_112272g0010

Target Alias Description ECC score Gene Family Method Actions
Zm00001e019387_P001 Zm00001e019387 Pentatricopeptide repeat-containing protein At5g39980,... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 624 650
IPR002885 Pentatricopeptide_repeat 510 553
IPR002885 Pentatricopeptide_repeat 264 311
IPR002885 Pentatricopeptide_repeat 471 502
IPR002885 Pentatricopeptide_repeat 324 383
IPR002885 Pentatricopeptide_repeat 393 453
No external refs found!