MA_111475g0010


Description : Zinc finger CCCH domain-containing protein 55 OS=Oryza sativa subsp. japonica (sp|q6yyc0|c3h55_orysj : 86.7)


Gene families : OG0000859 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000859_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_111475g0010

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00071p00110320 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C3H zinc... 0.02 OrthoFinder output from all 47 species
AMTR_s00154p00086540 evm_27.TU.AmTr_v1... Zinc finger CCCH domain-containing protein 38... 0.03 OrthoFinder output from all 47 species
AMTR_s00154p00087040 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AT3G18640 No alias Zinc finger C-x8-C-x5-C-x3-H type family protein 0.02 OrthoFinder output from all 47 species
Adi_g020080 No alias component *(FES1) of FRI-C transcription effector... 0.05 OrthoFinder output from all 47 species
Adi_g051624 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g086845 No alias component *(FES1) of FRI-C transcription effector... 0.05 OrthoFinder output from all 47 species
Ala_g14556 No alias component *(FES1) of FRI-C transcription effector... 0.05 OrthoFinder output from all 47 species
Ala_g33431 No alias component *(FES1) of FRI-C transcription effector... 0.03 OrthoFinder output from all 47 species
Ala_g38718 No alias component *(FES1) of FRI-C transcription effector... 0.03 OrthoFinder output from all 47 species
Aop_g08771 No alias component *(FES1) of FRI-C transcription effector... 0.06 OrthoFinder output from all 47 species
Aop_g31626 No alias component *(FES1) of FRI-C transcription effector... 0.07 OrthoFinder output from all 47 species
Ceric.09G003600.1 Ceric.09G003600 component *(FES1) of FRI-C transcription effector... 0.04 OrthoFinder output from all 47 species
Ceric.20G066500.1 Ceric.20G066500 component *(FES1) of FRI-C transcription effector... 0.03 OrthoFinder output from all 47 species
Ceric.29G050700.1 Ceric.29G050700 component *(FES1) of FRI-C transcription effector... 0.04 OrthoFinder output from all 47 species
Dac_g12746 No alias component *(FES1) of FRI-C transcription effector... 0.04 OrthoFinder output from all 47 species
Dcu_g07178 No alias component *(FES1) of FRI-C transcription effector... 0.05 OrthoFinder output from all 47 species
Ehy_g18865 No alias component *(FES1) of FRI-C transcription effector... 0.03 OrthoFinder output from all 47 species
GSVIVT01008114001 No alias Zinc finger CCCH domain-containing protein 38... 0.04 OrthoFinder output from all 47 species
GSVIVT01010035001 ACCD RNA biosynthesis.transcriptional activation.C3H zinc... 0.09 OrthoFinder output from all 47 species
GSVIVT01021094001 FES1 RNA biosynthesis.transcriptional activation.C3H zinc... 0.02 OrthoFinder output from all 47 species
Gb_00875 No alias C3H zinc finger transcription factor 0.04 OrthoFinder output from all 47 species
Gb_26302 No alias C3H zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
LOC_Os05g41790.1 LOC_Os05g41790 C3H zinc finger transcription factor 0.05 OrthoFinder output from all 47 species
LOC_Os08g04170.1 LOC_Os08g04170 C3H zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Len_g20647 No alias component *(FES1) of FRI-C transcription effector... 0.02 OrthoFinder output from all 47 species
Len_g22996 No alias component *(FES1) of FRI-C transcription effector... 0.03 OrthoFinder output from all 47 species
Lfl_g05738 No alias component *(FES1) of FRI-C transcription effector... 0.04 OrthoFinder output from all 47 species
MA_10435667g0010 No alias Zinc finger CCCH domain-containing protein 38... 0.03 OrthoFinder output from all 47 species
MA_10435667g0020 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_111475g0020 No alias no hits & (original description: none) 0.15 OrthoFinder output from all 47 species
MA_321233g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Mp1g05400.1 No alias Zinc finger CCCH domain-containing protein 55 OS=Oryza... 0.08 OrthoFinder output from all 47 species
Nbi_g04479 No alias component *(FES1) of FRI-C transcription effector... 0.03 OrthoFinder output from all 47 species
Nbi_g33981 No alias component *(FES1) of FRI-C transcription effector... 0.02 OrthoFinder output from all 47 species
Ore_g08246 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g30501 No alias component *(FES1) of FRI-C transcription effector... 0.03 OrthoFinder output from all 47 species
Ppi_g43758 No alias component *(FES1) of FRI-C transcription effector... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000565 No alias component *(FES1) of FRI-C transcription effector... 0.02 OrthoFinder output from all 47 species
Sam_g30142 No alias component *(FES1) of FRI-C transcription effector... 0.02 OrthoFinder output from all 47 species
Solyc03g006350.3.1 FES1, Solyc03g006350 C3H zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Solyc06g069440.3.1 Solyc06g069440 Zinc finger CCCH domain-containing protein 38... 0.04 OrthoFinder output from all 47 species
Spa_g08435 No alias component *(FES1) of FRI-C transcription effector... 0.04 OrthoFinder output from all 47 species
Spa_g17866 No alias component *(FES1) of FRI-C transcription effector... 0.03 OrthoFinder output from all 47 species
Tin_g10851 No alias component *(FES1) of FRI-C transcription effector... 0.04 OrthoFinder output from all 47 species
Tin_g26553 No alias component *(FES1) of FRI-C transcription effector... 0.05 OrthoFinder output from all 47 species
Zm00001e000843_P002 Zm00001e000843 Zinc finger CCCH domain-containing protein 55 OS=Oryza... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!