MA_111099g0010

Description : subfamily ABCB transporter

Gene families : OG0000048 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: MA_111099g0010

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00018p00193700	ABCB14,...	ABC transporter B family member 14 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
AMTR_s00018p00193820	PGP1, ABCB1,...	ABC transporter B family member 1 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
AMTR_s00045p00109790	PGP11,...	No description available	0.02	OrthoFinder output from all 47 species
AMTR_s00045p00109940	PGP11,...	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
AMTR_s00090p00165440	evm_27.TU.AmTr_v1...	Solute transport.primary active transport.ABC...	0.02	OrthoFinder output from all 47 species
AT3G28415	No alias	ABC transporter family protein	0.04	OrthoFinder output from all 47 species
AT3G55320	PGP20	P-glycoprotein 20	0.05	OrthoFinder output from all 47 species
AT3G62150	PGP21	P-glycoprotein 21	0.04	OrthoFinder output from all 47 species
AT4G01820	PGP3, MDR3	P-glycoprotein 3	0.04	OrthoFinder output from all 47 species
Adi_g025752	ABCB19,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g029160	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g058585	ABCB19,...	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g087061	ABCB19,...	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Adi_g087129	No alias	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g11046	PGP2	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g15862	ATPGP4, PGP4, ABCB4, MDR4	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g26174	No alias	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g26381	No alias	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g33590	PGP2	subfamily ABCB transporter & original description: none	0.04	OrthoFinder output from all 47 species
Aop_g14003	PGP2	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g22258	PGP2	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g29915	PGP1, ABCB1, ATPGP1	subfamily ABCB transporter & original description: none	0.04	OrthoFinder output from all 47 species
Aop_g36046	ABCB19,...	subfamily ABCB transporter & original description: none	0.06	OrthoFinder output from all 47 species
Aop_g68609	PGP13	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene12320.t2	PGP2, Aspi01Gene12320	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene62048.t1	PGP2, Aspi01Gene62048	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene62055.t1	ABCB19,...	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.06G076400.1	ABCB19,...	subfamily ABCB transporter & original description:...	0.02	OrthoFinder output from all 47 species
Ceric.10G031400.1	PGP13, Ceric.10G031400	subfamily ABCB transporter & original description:...	0.05	OrthoFinder output from all 47 species
Dac_g06939	PGP13	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g26046	PGP1, ABCB1, ATPGP1	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g33169	ABCB19,...	subfamily ABCB transporter & original description: none	0.04	OrthoFinder output from all 47 species
Dde_g46023	PGP13	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g23811	ABCB19,...	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01009946001	ABCB14, ATABCB14, PGP14	Solute transport.primary active transport.ABC...	0.06	OrthoFinder output from all 47 species
GSVIVT01015306001	No alias	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
GSVIVT01017696001	PGP11	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
GSVIVT01028256001	PGP11	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
Gb_02468	No alias	subfamily ABCB transporter	0.02	OrthoFinder output from all 47 species
Gb_06993	No alias	serine carboxypeptidase. subfamily ABCB transporter	0.03	OrthoFinder output from all 47 species
Gb_07563	ABCB19,...	subfamily ABCB transporter	0.02	OrthoFinder output from all 47 species
Gb_10211	No alias	subfamily ABCB transporter	0.03	OrthoFinder output from all 47 species
Gb_10215	No alias	subfamily ABCB transporter	0.03	OrthoFinder output from all 47 species
Gb_10216	No alias	subfamily ABCB transporter	0.03	OrthoFinder output from all 47 species
Gb_32125	PGP11	subfamily ABCB transporter	0.03	OrthoFinder output from all 47 species
Gb_33057	ABCB19,...	subfamily ABCB transporter	0.03	OrthoFinder output from all 47 species
Gb_36497	No alias	subfamily ABCB transporter	0.02	OrthoFinder output from all 47 species
LOC_Os01g18670.1	PGP21, LOC_Os01g18670	subfamily ABCB transporter	0.02	OrthoFinder output from all 47 species
LOC_Os01g50070.1	LOC_Os01g50070	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
LOC_Os01g50080.1	ATPGP4, PGP4,...	subfamily ABCB transporter	0.04	OrthoFinder output from all 47 species
LOC_Os01g50160.1	PGP11, LOC_Os01g50160	subfamily ABCB transporter	0.04	OrthoFinder output from all 47 species
LOC_Os02g09720.1	LOC_Os02g09720	subfamily ABCB transporter	0.03	OrthoFinder output from all 47 species
LOC_Os05g04610.1	ATPGP4, PGP4,...	subfamily ABCB transporter	0.03	OrthoFinder output from all 47 species
Len_g57621	PGP11	subfamily ABCB transporter & original description: none	0.04	OrthoFinder output from all 47 species
MA_10134765g0010	PGP11	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
MA_102299g0010	No alias	Putative multidrug resistance protein OS=Oryza sativa...	0.04	OrthoFinder output from all 47 species
MA_114017g0010	No alias	subfamily ABCB transporter	0.04	OrthoFinder output from all 47 species
MA_1824g0010	No alias	Putative multidrug resistance protein OS=Oryza sativa...	0.03	OrthoFinder output from all 47 species
MA_636449g0010	No alias	subfamily ABCB transporter	0.04	OrthoFinder output from all 47 species
MA_79399g0010	No alias	Putative multidrug resistance protein OS=Oryza sativa...	0.06	OrthoFinder output from all 47 species
MA_83806g0010	No alias	subfamily ABCB transporter	0.07	OrthoFinder output from all 47 species
MA_8590327g0010	No alias	ABC transporter B family member 17 OS=Arabidopsis...	0.07	OrthoFinder output from all 47 species
MA_9148200g0010	No alias	ABC transporter B family member 15 OS=Arabidopsis...	0.06	OrthoFinder output from all 47 species
Mp2g11920.1	ABCB19,...	subfamily ABCB transporter	0.02	OrthoFinder output from all 47 species
Mp3g11830.1	ABCB19,...	auxin efflux transporter (ABCB19). subfamily ABCB transporter	0.02	OrthoFinder output from all 47 species
Mp7g04390.1	ATPGP4, PGP4, ABCB4, MDR4	subfamily ABCB transporter	0.03	OrthoFinder output from all 47 species
Nbi_g08816	ABCB19,...	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g27262	PGP13	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g30543	PGP18	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g33236	ABCB19,...	ABC-B-type transporter *(AMN3) & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g42482	PGP13	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g04029	PGP11	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g20355	PGP21	subfamily ABCB transporter & original description: none	0.05	OrthoFinder output from all 47 species
Pp3c17_16450V3.1	ABCB19,...	ATP binding cassette subfamily B19	0.01	OrthoFinder output from all 47 species
Ppi_g13937	PGP2	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g17867	PGP11	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Smo123915	PGP11	Solute transport.primary active transport.ABC...	0.04	OrthoFinder output from all 47 species
Smo230688	ABCB19,...	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
Smo233433	No alias	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
Smo419448	ABCB19,...	ABC transporter B family member 19 OS=Arabidopsis thaliana	0.04	OrthoFinder output from all 47 species
Smo92485	ABCB19,...	Solute transport.primary active transport.ABC...	0.02	OrthoFinder output from all 47 species
Solyc03g005860.4.1	PGP11, Solyc03g005860	subfamily ABCB transporter	0.05	OrthoFinder output from all 47 species
Solyc05g013890.3.1	Solyc05g013890	subfamily ABCB transporter	0.03	OrthoFinder output from all 47 species
Solyc06g009280.1.1	PGP11, Solyc06g009280	subfamily ABCB transporter	0.03	OrthoFinder output from all 47 species
Solyc06g009290.4.1	PGP21, Solyc06g009290	subfamily ABCB transporter	0.02	OrthoFinder output from all 47 species
Solyc08g076720.4.1	PGP2, Solyc08g076720	subfamily ABCB transporter	0.05	OrthoFinder output from all 47 species
Solyc11g067300.2.1	PGP11, Solyc11g067300	subfamily ABCB transporter	0.03	OrthoFinder output from all 47 species
Solyc12g098840.3.1	PGP11, Solyc12g098840	subfamily ABCB transporter	0.02	OrthoFinder output from all 47 species
Tin_g06699	PGP2	subfamily ABCB transporter & original description: none	0.04	OrthoFinder output from all 47 species
Zm00001e028117_P001	PGP11, Zm00001e028117	subfamily ABCB transporter	0.02	OrthoFinder output from all 47 species
Zm00001e041087_P002	Zm00001e041087	subfamily ABCB transporter	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATP hydrolysis activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140657	ATP-dependent activity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like_ATP-bd	382	530
IPR011527	ABC1_TM_dom	89	307
IPR011527	ABC1_TM_dom	735	894
IPR003439	ABC_transporter-like_ATP-bd	963	1112

External Links

No external refs found!

MA_111099g0010

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation