Aliases : PAB2, PABP2, ATPAB2
Description : mRNA poly-A-tail binding factor (PABP)
Gene families : OG0000326 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000326_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT1G49760 | PAB8, PABP8 | poly(A) binding protein 8 | 0.04 | OrthoFinder output from all 47 species | |
AT2G23350 | PABP4, PAB4 | poly(A) binding protein 4 | 0.05 | OrthoFinder output from all 47 species | |
Adi_g023675 | PAB2, PABP2, ATPAB2 | mRNA poly-A-tail binding factor *(PABP) & original... | 0.03 | OrthoFinder output from all 47 species | |
Adi_g024803 | PAB5 | mRNA poly-A-tail binding factor *(PABP) & original... | 0.02 | OrthoFinder output from all 47 species | |
Adi_g077420 | PAB2, PABP2, ATPAB2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Adi_g088081 | PAB2, PABP2, ATPAB2 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Adi_g112648 | PAB2, PABP2, ATPAB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Adi_g112649 | PAB2, PABP2, ATPAB2 | mRNA poly-A-tail binding factor *(PABP) & original... | 0.04 | OrthoFinder output from all 47 species | |
Ala_g02254 | PAB2, PABP2, ATPAB2 | mRNA poly-A-tail binding factor *(PABP) & original... | 0.03 | OrthoFinder output from all 47 species | |
Ala_g06987 | PAB2, PABP2, ATPAB2 | mRNA poly-A-tail binding factor *(PABP) & original... | 0.03 | OrthoFinder output from all 47 species | |
Als_g23246 | PAB8, PABP8 | mRNA poly-A-tail binding factor *(PABP) & original... | 0.02 | OrthoFinder output from all 47 species | |
Aop_g05955 | PAB2, PABP2, ATPAB2 | mRNA poly-A-tail binding factor *(PABP) & original... | 0.05 | OrthoFinder output from all 47 species | |
Aop_g13336 | PAB2, PABP2, ATPAB2 | mRNA poly-A-tail binding factor *(PABP) & original... | 0.03 | OrthoFinder output from all 47 species | |
Cba_g10012 | PAB2, PABP2, ATPAB2 | mRNA poly-A-tail binding factor *(PABP) & original... | 0.05 | OrthoFinder output from all 47 species | |
Cba_g37444 | PAB2, PABP2, ATPAB2 | mRNA poly-A-tail binding factor *(PABP) & original... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.29G016700.1 | PAB2, PABP2,... | mRNA poly-A-tail binding factor *(PABP) & original... | 0.04 | OrthoFinder output from all 47 species | |
Ceric.34G008600.1 | PAB2, PABP2,... | mRNA poly-A-tail binding factor *(PABP) & original... | 0.04 | OrthoFinder output from all 47 species | |
Ceric.37G012300.1 | PAB2, PABP2,... | mRNA poly-A-tail binding factor *(PABP) & original... | 0.03 | OrthoFinder output from all 47 species | |
Ehy_g07029 | PAB2, PABP2, ATPAB2 | mRNA poly-A-tail binding factor *(PABP) & original... | 0.04 | OrthoFinder output from all 47 species | |
Ehy_g07805 | PAB2, PABP2, ATPAB2 | mRNA poly-A-tail binding factor *(PABP) & original... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01013699001 | PAB3 | Protein biosynthesis.translation initiation.mRNA... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01022079001 | PAB2, PABP2, ATPAB2 | Protein biosynthesis.translation initiation.mRNA... | 0.03 | OrthoFinder output from all 47 species | |
Gb_00731 | PAB2, PABP2, ATPAB2 | mRNA poly-A-tail binding factor (PABP) | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os04g42600.2 | PAB2, PABP2,... | mRNA poly-A-tail binding factor (PABP) | 0.02 | OrthoFinder output from all 47 species | |
Msp_g43985 | PAB2, PABP2, ATPAB2 | mRNA poly-A-tail binding factor *(PABP) & original... | 0.02 | OrthoFinder output from all 47 species | |
Ore_g08384 | PAB2, PABP2, ATPAB2 | mRNA poly-A-tail binding factor *(PABP) & original... | 0.06 | OrthoFinder output from all 47 species | |
Ore_g17615 | PAB2, PABP2, ATPAB2 | mRNA poly-A-tail binding factor *(PABP) & original... | 0.03 | OrthoFinder output from all 47 species | |
Pir_g04520 | PAB8, PABP8 | mRNA poly-A-tail binding factor *(PABP) & original... | 0.03 | OrthoFinder output from all 47 species | |
Pir_g08773 | PAB2, PABP2, ATPAB2 | mRNA poly-A-tail binding factor *(PABP) & original... | 0.02 | OrthoFinder output from all 47 species | |
Pir_g19027 | PAB2, PABP2, ATPAB2 | mRNA poly-A-tail binding factor *(PABP) & original... | 0.03 | OrthoFinder output from all 47 species | |
Pir_g19320 | PAB8, PABP8 | mRNA poly-A-tail binding factor *(PABP) & original... | 0.02 | OrthoFinder output from all 47 species | |
Pnu_g31375 | PAB2, PABP2, ATPAB2 | mRNA poly-A-tail binding factor *(PABP) & original... | 0.03 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0157.g023696 | PAB8, PABP8 | mRNA poly-A-tail binding factor *(PABP) & original... | 0.04 | OrthoFinder output from all 47 species | |
Solyc12g088720.2.1 | PAB2, PABP2,... | mRNA poly-A-tail binding factor (PABP) | 0.04 | OrthoFinder output from all 47 species | |
Spa_g08810 | PAB8, PABP8 | mRNA poly-A-tail binding factor *(PABP) & original... | 0.02 | OrthoFinder output from all 47 species | |
Spa_g26485 | PAB2, PABP2, ATPAB2 | mRNA poly-A-tail binding factor *(PABP) & original... | 0.04 | OrthoFinder output from all 47 species | |
Tin_g14974 | PAB2, PABP2, ATPAB2 | mRNA poly-A-tail binding factor *(PABP) & original... | 0.02 | OrthoFinder output from all 47 species | |
Tin_g29780 | PAB8, PABP8 | mRNA poly-A-tail binding factor *(PABP) & original... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e009430_P002 | PAB2, PABP2,... | mRNA poly-A-tail binding factor (PABP) | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e033592_P004 | PAB8, PABP8,... | mRNA poly-A-tail binding factor (PABP) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e041182_P002 | PAB8, PABP8,... | mRNA poly-A-tail binding factor (PABP) | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
MF | GO:0003723 | RNA binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003916 | DNA topoisomerase activity | IEP | HCCA |
BP | GO:0006259 | DNA metabolic process | IEP | HCCA |
BP | GO:0006265 | DNA topological change | IEP | HCCA |
BP | GO:0006996 | organelle organization | IEP | HCCA |
MF | GO:0016853 | isomerase activity | IEP | HCCA |
BP | GO:0051276 | chromosome organization | IEP | HCCA |
BP | GO:0071103 | DNA conformation change | IEP | HCCA |
MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
No external refs found! |