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  5. MA_110148g0010

MA_110148g0010 (GMD1)


Aliases : GMD1

Description : GDP-D-mannose 4,6-dehydratase (MUR1)


Gene families : OG0001979 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001979_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_110148g0010
Cluster HCCA: Cluster_94

Target Alias Description ECC score Gene Family Method Actions
Ala_g01453 GMD2, MUR1, MUR_1 EC_4.2 carbon-oxygen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.34G056900.1 GMD1, Ceric.34G056900 EC_4.2 carbon-oxygen lyase & original description:... 0.05 OrthoFinder output from all 47 species
Dcu_g05300 GMD1 EC_4.2 carbon-oxygen lyase & original description: none 0.05 OrthoFinder output from all 47 species
Gb_28531 GMD1 GDP-D-mannose 4,6-dehydratase (MUR1) 0.04 OrthoFinder output from all 47 species
Lfl_g05274 GMD2, MUR1, MUR_1 EC_4.2 carbon-oxygen lyase & original description: none 0.04 OrthoFinder output from all 47 species
Mp1g09600.1 GMD2, MUR1, MUR_1 GDP-D-mannose 4,6-dehydratase (MUR1) 0.03 OrthoFinder output from all 47 species
Mp6g07110.1 GMD2, MUR1, MUR_1 GDP-D-mannose 4,6-dehydratase (MUR1) 0.04 OrthoFinder output from all 47 species
Nbi_g08499 GMD1 EC_4.2 carbon-oxygen lyase & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g05009 GMD2, MUR1, MUR_1 EC_4.2 carbon-oxygen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g07272 GMD1 EC_4.2 carbon-oxygen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e036558_P001 GMD2, MUR1,... GDP-D-mannose 4,6-dehydratase (MUR1) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005048 signal sequence binding IEP HCCA
BP GO:0006621 protein retention in ER lumen IEP HCCA
BP GO:0032507 maintenance of protein location in cell IEP HCCA
MF GO:0033218 amide binding IEP HCCA
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP HCCA
MF GO:0042277 peptide binding IEP HCCA
BP GO:0045185 maintenance of protein location IEP HCCA
MF GO:0046923 ER retention sequence binding IEP HCCA
BP GO:0051235 maintenance of location IEP HCCA
BP GO:0051651 maintenance of location in cell IEP HCCA
BP GO:0072595 maintenance of protein localization in organelle IEP HCCA
InterPro domains Description Start Stop
IPR016040 NAD(P)-bd_dom 11 325
No external refs found!