MA_107576g0010

Description : subfamily ABCB transporter

Gene families : OG0000048 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: MA_107576g0010
Cluster	HCCA: Cluster_250

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00045p00108620	PGP11,...	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
AMTR_s00045p00109790	PGP11,...	No description available	0.02	OrthoFinder output from all 47 species
AT1G28010	ABCB14, ATABCB14, PGP14	P-glycoprotein 14	0.02	OrthoFinder output from all 47 species
AT2G47000	ATPGP4, PGP4, ABCB4, MDR4	ATP binding cassette subfamily B4	0.03	OrthoFinder output from all 47 species
AT3G28360	PGP16	P-glycoprotein 16	0.02	OrthoFinder output from all 47 species
AT3G28415	No alias	ABC transporter family protein	0.03	OrthoFinder output from all 47 species
AT3G62150	PGP21	P-glycoprotein 21	0.03	OrthoFinder output from all 47 species
AT4G01830	PGP5	P-glycoprotein 5	0.04	OrthoFinder output from all 47 species
AT4G25960	PGP2	P-glycoprotein 2	0.03	OrthoFinder output from all 47 species
Adi_g010452	ABCB19,...	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g015267	ABCB19,...	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g17861	ABCB19,...	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ala_g24244	ABCB19,...	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Als_g09585	PGP10	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Als_g28385	PGP1, ABCB1, ATPGP1	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Als_g39233	ABCB19,...	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g11005	PGP11	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g22258	PGP2	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g29915	PGP1, ABCB1, ATPGP1	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g68609	PGP13	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene08454.t1	PGP11, Aspi01Gene08454	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene08455.t1	PGP11, Aspi01Gene08455	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene46501.t1	ABCB19,...	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene52651.t1	PGP2, Aspi01Gene52651	subfamily ABCB transporter & original description: none	0.04	OrthoFinder output from all 47 species
Azfi_s0010.g012029	ABCB19,...	subfamily ABCB transporter & original description: CDS=121-4035	0.02	OrthoFinder output from all 47 species
Azfi_s2496.g111845	ABCB19,...	subfamily ABCB transporter & original description: CDS=142-3066	0.03	OrthoFinder output from all 47 species
Cba_g75977	No alias	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.14G049900.1	PGP11, Ceric.14G049900	subfamily ABCB transporter & original description:...	0.03	OrthoFinder output from all 47 species
Dac_g35627	PGP2	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Dac_g39907	No alias	subfamily ABCB transporter & original description: none	0.04	OrthoFinder output from all 47 species
Dac_g40237	ABCB19,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Dcu_g20621	PGP2	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g47815	PGP11	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Dde_g46023	PGP13	subfamily ABCB transporter & original description: none	0.04	OrthoFinder output from all 47 species
Ehy_g13758	ABCB19,...	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01006613001	No alias	No description available	0.02	OrthoFinder output from all 47 species
GSVIVT01013125001	PGP2	Solute transport.primary active transport.ABC...	0.02	OrthoFinder output from all 47 species
GSVIVT01028256001	PGP11	Solute transport.primary active transport.ABC...	0.04	OrthoFinder output from all 47 species
GSVIVT01032578001	No alias	Solute transport.primary active transport.ABC...	0.04	OrthoFinder output from all 47 species
Gb_02468	No alias	subfamily ABCB transporter	0.05	OrthoFinder output from all 47 species
Gb_02469	No alias	subfamily ABCB transporter	0.05	OrthoFinder output from all 47 species
Gb_07563	ABCB19,...	subfamily ABCB transporter	0.06	OrthoFinder output from all 47 species
Gb_32125	PGP11	subfamily ABCB transporter	0.05	OrthoFinder output from all 47 species
Gb_33057	ABCB19,...	subfamily ABCB transporter	0.05	OrthoFinder output from all 47 species
Gb_33058	ABCB19,...	subfamily ABCB transporter	0.05	OrthoFinder output from all 47 species
LOC_Os01g18670.1	PGP21, LOC_Os01g18670	subfamily ABCB transporter	0.03	OrthoFinder output from all 47 species
LOC_Os01g50160.1	PGP11, LOC_Os01g50160	subfamily ABCB transporter	0.03	OrthoFinder output from all 47 species
LOC_Os02g09720.1	LOC_Os02g09720	subfamily ABCB transporter	0.03	OrthoFinder output from all 47 species
LOC_Os08g45030.1	PGP1, ABCB1,...	subfamily ABCB transporter	0.03	OrthoFinder output from all 47 species
Len_g23455	PGP11	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Lfl_g40621	ABCB19,...	subfamily ABCB transporter & original description: none	0.04	OrthoFinder output from all 47 species
Lfl_g41280	PGP11	not classified & original description: none	0.02	OrthoFinder output from all 47 species
MA_10432922g0010	No alias	subfamily ABCB transporter	0.04	OrthoFinder output from all 47 species
MA_144373g0010	No alias	ABC transporter B family member 15 OS=Arabidopsis...	0.04	OrthoFinder output from all 47 species
MA_145446g0020	No alias	ABC transporter B family member 15 OS=Arabidopsis...	0.04	OrthoFinder output from all 47 species
MA_178534g0010	PGP2	ABC transporter B family member 2 OS=Arabidopsis...	0.07	OrthoFinder output from all 47 species
MA_3448627g0010	No alias	no hits & (original description: none)	0.05	OrthoFinder output from all 47 species
MA_93218g0010	PGP11	ABC transporter B family member 4 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Msp_g26680	PGP11	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Msp_g32270	No alias	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Nbi_g27262	PGP13	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Nbi_g32847	PGP21	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g09833	ABCB19,...	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g22891	PGP13	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g28855	PGP10	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g29606	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g57324	ATPGP4, PGP4, ABCB4, MDR4	subfamily ABCB transporter & original description: none	0.04	OrthoFinder output from all 47 species
Pnu_g20355	PGP21	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Pnu_g25857	PGP2	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Pp3c17_16450V3.1	ABCB19,...	ATP binding cassette subfamily B19	0.01	OrthoFinder output from all 47 species
Ppi_g04001	ABCB19,...	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g60298	PGP2	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0080.g017899	PGP11	subfamily ABCB transporter & original description: CDS=362-4450	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0111.g020710	ABCB19,...	not classified & original description: CDS=1-1380	0.03	OrthoFinder output from all 47 species
Sam_g03287	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g34538	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Solyc06g009280.1.1	PGP11, Solyc06g009280	subfamily ABCB transporter	0.04	OrthoFinder output from all 47 species
Solyc06g009290.4.1	PGP21, Solyc06g009290	subfamily ABCB transporter	0.05	OrthoFinder output from all 47 species
Solyc11g067300.2.1	PGP11, Solyc11g067300	subfamily ABCB transporter	0.04	OrthoFinder output from all 47 species
Solyc12g098840.3.1	PGP11, Solyc12g098840	subfamily ABCB transporter	0.02	OrthoFinder output from all 47 species
Spa_g09413	PGP2	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g21974	ABCB19,...	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g26470	ABCB19,...	subfamily ABCB transporter & original description: none	0.04	OrthoFinder output from all 47 species
Spa_g56665	ABCB19,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Tin_g06699	PGP2	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Tin_g06701	ABCB19,...	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Tin_g08424	PGP11	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Tin_g35292	ATPGP4, PGP4, ABCB4, MDR4	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e041087_P002	Zm00001e041087	subfamily ABCB transporter	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATP hydrolysis activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140657	ATP-dependent activity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0006813	potassium ion transport	IEP	HCCA
MF	GO:0015079	potassium ion transmembrane transporter activity	IEP	HCCA
MF	GO:0016491	oxidoreductase activity	IEP	HCCA
MF	GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	IEP	HCCA
MF	GO:0020037	heme binding	IEP	HCCA
BP	GO:0034220	monoatomic ion transmembrane transport	IEP	HCCA
MF	GO:0046873	metal ion transmembrane transporter activity	IEP	HCCA
MF	GO:0046906	tetrapyrrole binding	IEP	HCCA
MF	GO:0051287	NAD binding	IEP	HCCA
BP	GO:0055114	obsolete oxidation-reduction process	IEP	HCCA
BP	GO:0071805	potassium ion transmembrane transport	IEP	HCCA
BP	GO:0098655	monoatomic cation transmembrane transport	IEP	HCCA
BP	GO:0098660	inorganic ion transmembrane transport	IEP	HCCA
BP	GO:0098662	inorganic cation transmembrane transport	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like_ATP-bd	896	1045
IPR011527	ABC1_TM_dom	61	306
IPR011527	ABC1_TM_dom	556	816
IPR003439	ABC_transporter-like_ATP-bd	318	408

External Links

No external refs found!

MA_107576g0010

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation