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  5. MA_10689g0010

MA_10689g0010


Description : PHD finger transcription factor


Gene families : OG0003668 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003668_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10689g0010

Target Alias Description ECC score Gene Family Method Actions
AT5G12400 No alias DNA binding;zinc ion binding;DNA binding 0.06 OrthoFinder output from all 47 species
AT5G35210 No alias metalloendopeptidases;zinc ion binding;DNA binding 0.05 OrthoFinder output from all 47 species
Adi_g023154 No alias PHD finger transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g107345 No alias PHD finger transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g10447 No alias PHD finger transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g26643 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g29357 No alias PHD finger transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene36310.t1 Aspi01Gene36310 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g75389 No alias PHD finger transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cre05.g247000 No alias No description available 0.03 OrthoFinder output from all 47 species
Dac_g14658 No alias PHD finger transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g04154 No alias PHD finger transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g09845 No alias PHD finger transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g08699 No alias PHD finger transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g17420 No alias PHD finger transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g31521 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01031411001 No alias RNA biosynthesis.transcriptional activation.PHD finger... 0.05 OrthoFinder output from all 47 species
GSVIVT01037231001 No alias RNA biosynthesis.transcriptional activation.PHD finger... 0.03 OrthoFinder output from all 47 species
LOC_Os11g05130.1 LOC_Os11g05130 PHD finger transcription factor 0.05 OrthoFinder output from all 47 species
Len_g09016 No alias PHD finger transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05757 No alias PHD finger transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Solyc11g065160.3.1 Solyc11g065160 PHD finger transcription factor 0.03 OrthoFinder output from all 47 species
Solyc11g066780.3.1 Solyc11g066780 PHD finger transcription factor 0.07 OrthoFinder output from all 47 species
Zm00001e035778_P001 Zm00001e035778 PHD finger transcription factor 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006396 RNA processing IEP HCCA
InterPro domains Description Start Stop
IPR018501 DDT_dom 293 349
IPR028942 WHIM1_dom 407 441
IPR019787 Znf_PHD-finger 544 586
No external refs found!