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  5. MA_105495g0010

MA_105495g0010


Description : Pentatricopeptide repeat-containing protein At5g64320, mitochondrial OS=Arabidopsis thaliana (sp|q9fmf6|pp444_arath : 384.0)


Gene families : OG0005897 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005897_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_105495g0010
Cluster HCCA: Cluster_98

Target Alias Description ECC score Gene Family Method Actions
Gb_05881 No alias Pentatricopeptide repeat-containing protein At1g62670,... 0.05 OrthoFinder output from all 47 species
MA_78481g0010 No alias Pentatricopeptide repeat-containing protein At1g63130,... 0.08 OrthoFinder output from all 47 species
MA_914400g0010 No alias Pentatricopeptide repeat-containing protein At5g55840... 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 117 148
IPR002885 Pentatricopeptide_repeat 155 204
IPR002885 Pentatricopeptide_repeat 435 484
IPR002885 Pentatricopeptide_repeat 296 344
IPR002885 Pentatricopeptide_repeat 365 414
IPR002885 Pentatricopeptide_repeat 575 624
IPR002885 Pentatricopeptide_repeat 505 554
IPR002885 Pentatricopeptide_repeat 225 274
No external refs found!