MA_104604g0010 (WLIM1)


Aliases : WLIM1

Description : transcription factor (LIM)


Gene families : OG0000440 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000440_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_104604g0010

Target Alias Description ECC score Gene Family Method Actions
AT2G39900 No alias GATA type zinc finger transcription factor family protein 0.06 OrthoFinder output from all 47 species
AT3G55770 No alias GATA type zinc finger transcription factor family protein 0.02 OrthoFinder output from all 47 species
Adi_g004397 WLIM1 LIM-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g007611 WLIM1 LIM-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g077331 WLIM1 LIM-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g077333 WLIM1 LIM-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g080585 WLIM1 LIM-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g097642 WLIM1 LIM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g106595 WLIM1 LIM-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g07526 WLIM1 LIM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g11111 WLIM1 LIM-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g02798 No alias LIM-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g20871 WLIM1 LIM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g21872 WLIM1 LIM-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g18170 WLIM1 LIM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g10165 WLIM1 LIM-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g06316 WLIM1 LIM-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g20782 WLIM1 LIM-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.34G067600.1 WLIM1, Ceric.34G067600 LIM-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g34912 WLIM1 LIM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g05547 No alias LIM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01026849001 No alias RNA biosynthesis.transcriptional activation.LIM... 0.03 OrthoFinder output from all 47 species
Gb_09450 No alias transcription factor (LIM) 0.03 OrthoFinder output from all 47 species
Len_g07886 WLIM1 LIM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g03720 WLIM1 LIM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g27678 WLIM1 LIM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g00234 No alias LIM-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c11_18380V3.1 Pp3c11_18380 GATA type zinc finger transcription factor family protein 0.01 OrthoFinder output from all 47 species
Zm00001e007423_P001 Zm00001e007423 transcription factor (LIM) 0.03 OrthoFinder output from all 47 species
Zm00001e029431_P002 WLIM1, Zm00001e029431 transcription factor (LIM) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
InterPro domains Description Start Stop
IPR001781 Znf_LIM 10 64
IPR001781 Znf_LIM 110 165
No external refs found!