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  5. MA_10436973g0010

MA_10436973g0010 (AtOCT1, 1-Oct)


Aliases : AtOCT1, 1-Oct

Description : organic cation transporter (OCT)


Gene families : OG0001321 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001321_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10436973g0010
Cluster HCCA: Cluster_213

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00032p00186620 3-Oct, ATOCT3,... Solute transport.carrier-mediated transport.MFS... 0.03 OrthoFinder output from all 47 species
AT1G16390 3-Oct, ATOCT3 organic cation/carnitine transporter 3 0.03 OrthoFinder output from all 47 species
AT1G79410 AtOCT5, 5-Oct organic cation/carnitine transporter5 0.03 OrthoFinder output from all 47 species
Dcu_g10267 AtOCT4, 4-Oct organic cation transporter *(OCT) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01012912001 AtOCT1, 1-Oct Solute transport.carrier-mediated transport.MFS... 0.03 OrthoFinder output from all 47 species
Len_g08973 AtOCT4, 4-Oct organic cation transporter *(OCT) & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g40550 AtOCT4, 4-Oct organic cation transporter *(OCT) & original description: none 0.03 OrthoFinder output from all 47 species
MA_6288g0010 AtOCT1, 1-Oct organic cation transporter (OCT) 0.04 OrthoFinder output from all 47 species
Mp8g15970.1 AtOCT4, 4-Oct organic cation transporter (OCT) 0.03 OrthoFinder output from all 47 species
Solyc05g053860.4.1 3-Oct, ATOCT3,... organic cation transporter (OCT) 0.05 OrthoFinder output from all 47 species
Solyc07g063920.3.1 AtOCT4, 4-Oct,... organic cation transporter (OCT) 0.02 OrthoFinder output from all 47 species
Solyc12g017380.3.1 3-Oct, ATOCT3,... organic cation transporter (OCT) 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0022857 transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005337 nucleoside transmembrane transporter activity IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0015858 nucleoside transport IEP HCCA
BP GO:0015931 nucleobase-containing compound transport IEP HCCA
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:1901264 carbohydrate derivative transport IEP HCCA
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP HCCA
BP GO:1901642 nucleoside transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR005828 MFS_sugar_transport-like 219 393
IPR005828 MFS_sugar_transport-like 568 698
No external refs found!