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  5. MA_10436754g0010

MA_10436754g0010


Description : Protein TONSOKU OS=Arabidopsis thaliana (sp|q6q4d0|tons_arath : 97.1)


Gene families : OG0009270 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0009270_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10436754g0010

Target Alias Description ECC score Gene Family Method Actions
AT3G18730 TSK, BRU1, MGO3 tetratricopeptide repeat (TPR)-containing protein 0.09 OrthoFinder output from all 47 species
Aop_g05749 TSK, BRU1, MGO3 chromatin stabilizing factor *(TSK) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.09G039700.1 TSK, BRU1, MGO3,... chromatin stabilizing factor *(TSK) & original... 0.08 OrthoFinder output from all 47 species
GSVIVT01026545001 TSK, BRU1, MGO3 Cell cycle.interphase.DNA replication.preinitiation.TSK... 0.09 OrthoFinder output from all 47 species
Gb_06807 TSK, BRU1, MGO3 chromatin stabilizing factor (TSK) 0.11 OrthoFinder output from all 47 species
Len_g59655 TSK, BRU1, MGO3 chromatin stabilizing factor *(TSK) & original description: none 0.04 OrthoFinder output from all 47 species
Mp6g14510.1 TSK, BRU1, MGO3 chromatin stabilizing factor (TSK) 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0059.g015119 TSK, BRU1, MGO3 not classified & original description: CDS=1-582 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0179.g024740 TSK, BRU1, MGO3 chromatin stabilizing factor *(TSK) & original... 0.03 OrthoFinder output from all 47 species
Smo418913 TSK, BRU1, MGO3 Cell cycle.interphase.DNA replication.preinitiation.TSK... 0.04 OrthoFinder output from all 47 species
Solyc11g005690.3.1 TSK, BRU1, MGO3,... chromatin stabilizing factor (TSK) 0.06 OrthoFinder output from all 47 species
Tin_g11209 TSK, BRU1, MGO3 chromaTin stabilizing factor *(TSK) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e023747_P002 TSK, BRU1, MGO3,... chromatin stabilizing factor (TSK) 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003678 DNA helicase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
MF GO:0043138 3'-5' DNA helicase activity IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!