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  5. Mp8g17910.1

Mp8g17910.1


Description : histone demethylase (KDM5). transcription factor (JUMONJI)


Gene families : OG_01_0001111 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001111_tree ,
OG_02_0005382 (LandPlants) Phylogenetic Tree(s): OG_02_0005382_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp8g17910.1
Cluster HCCA: Cluster_60

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00253500 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.JUMONJI... 0.06 Archaeplastida
AT1G08620 PKDM7D Transcription factor jumonji (jmj) family protein / zinc... 0.09 Archaeplastida
AT1G63490 No alias transcription factor jumonji (jmjC) domain-containing protein 0.06 Archaeplastida
AT4G20400 PKDM7B, JMJ14 JUMONJI 14 0.02 Archaeplastida
Cre12.g514250 No alias RNA biosynthesis.transcriptional activation.JUMONJI... 0.02 Archaeplastida
GSVIVT01019761001 No alias RNA biosynthesis.transcriptional activation.JUMONJI... 0.06 Archaeplastida
GSVIVT01023517001 No alias RNA biosynthesis.transcriptional activation.JUMONJI... 0.16 Archaeplastida
GSVIVT01028351001 No alias RNA biosynthesis.transcriptional activation.JUMONJI... 0.03 Archaeplastida
Gb_26073 No alias histone demethylase (KDM5). transcription factor (JUMONJI) 0.04 Archaeplastida
Gb_27431 No alias histone demethylase (PKDM7). transcription factor (JUMONJI) 0.05 Archaeplastida
LOC_Os05g10770.1 No alias histone demethylase (PKDM7). transcription factor (JUMONJI) 0.05 Archaeplastida
MA_10434186g0010 No alias histone demethylase (PKDM7). transcription factor (JUMONJI) 0.04 Archaeplastida
MA_91656g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
Pp3c16_4220V3.1 No alias Transcription factor jumonji (jmj) family protein / zinc... 0.04 Archaeplastida
Pp3c21_10100V3.1 No alias JUMONJI 14 0.04 Archaeplastida
Solyc04g009990.3.1 No alias histone demethylase (PKDM7). transcription factor (JUMONJI) 0.02 Archaeplastida
Solyc08g081000.3.1 No alias histone demethylase (KDM5). transcription factor (JUMONJI) 0.02 Archaeplastida
Zm00001e013363_P002 No alias histone demethylase (KDM5). transcription factor (JUMONJI) 0.02 Archaeplastida
Zm00001e030938_P001 No alias histone demethylase (PKDM7). transcription factor (JUMONJI) 0.08 Archaeplastida
AMTR_s00009p00253500 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.JUMONJI... 0.05 LandPlants
AT1G63490 No alias transcription factor jumonji (jmjC) domain-containing protein 0.04 LandPlants
GSVIVT01019761001 No alias RNA biosynthesis.transcriptional activation.JUMONJI... 0.06 LandPlants
Gb_26073 No alias histone demethylase (KDM5). transcription factor (JUMONJI) 0.04 LandPlants
MA_10436180g0010 No alias no hits & (original description: none) 0.03 LandPlants
MA_11526g0010 No alias Putative lysine-specific demethylase JMJ16... 0.01 LandPlants
MA_91656g0010 No alias no hits & (original description: none) 0.02 LandPlants
Pp3c21_10100V3.1 No alias JUMONJI 14 0.04 LandPlants
Solyc08g081000.3.1 No alias histone demethylase (KDM5). transcription factor (JUMONJI) 0.02 LandPlants
Zm00001e013363_P002 No alias histone demethylase (KDM5). transcription factor (JUMONJI) 0.02 LandPlants

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004198 Znf_C5HC2 739 790
IPR013637 Lys_sp_deMease-like_dom 961 1138
IPR013637 Lys_sp_deMease-like_dom 1372 1561
IPR013637 Lys_sp_deMease-like_dom 850 1074
IPR013637 Lys_sp_deMease-like_dom 1135 1326
IPR003347 JmjC_dom 530 646
IPR019787 Znf_PHD-finger 359 405
IPR019787 Znf_PHD-finger 1867 1928
IPR003349 JmjN 46 79
IPR001606 ARID_dom 117 212
No external refs found!