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  5. MA_10436110g0020

MA_10436110g0020


Description : RING-C2-class E3 ligase


Gene families : OG0001463 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001463_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10436110g0020

Target Alias Description ECC score Gene Family Method Actions
AT3G48070 No alias RING/U-box superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G62910 No alias RING/U-box superfamily protein 0.02 OrthoFinder output from all 47 species
Cba_g00951 No alias E3 ubiquitin ligase *(PIRE) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.10G029100.1 Ceric.10G029100 E3 ubiquitin ligase *(PIRE) & original description:... 0.03 OrthoFinder output from all 47 species
Cre01.g040500 No alias No description available 0.02 OrthoFinder output from all 47 species
Pir_g15078 No alias E3 ubiquitin ligase *(PIRE) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0018995 host cellular component IEP HCCA
CC GO:0033643 host cell part IEP HCCA
CC GO:0033646 host intracellular part IEP HCCA
CC GO:0033647 host intracellular organelle IEP HCCA
CC GO:0033648 host intracellular membrane-bounded organelle IEP HCCA
CC GO:0042025 host cell nucleus IEP HCCA

No InterPro domains available for this sequence

No external refs found!