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  5. MA_10436082g0010

MA_10436082g0010 (TIC55-IV, ACD1-LIKE, PTC52)


Aliases : TIC55-IV, ACD1-LIKE, PTC52

Description : Protochlorophyllide-dependent translocon component 52, chloroplastic OS=Arabidopsis thaliana (sp|q8w496|ptc52_arath : 436.0)


Gene families : OG0000770 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000770_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10436082g0010

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00140p00074640 ACD1, PAO, LLS1,... Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll... 0.03 OrthoFinder output from all 47 species
Adi_g118091 TIC55-IV,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g11672 TIC55-IV,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g11225 TIC55-IV,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g08348 TIC55-IV,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g07297 TIC55-IV,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g08640 TIC55-IV,... not classified & original description: none 0.08 OrthoFinder output from all 47 species
Azfi_s0065.g035849 TIC55-IV,... not classified & original description: CDS=67-1659 0.05 OrthoFinder output from all 47 species
Ceric.23G050300.1 TIC55-IV,... not classified & original description: pacid=50610352... 0.03 OrthoFinder output from all 47 species
Cre10.g450550 ACD1, PAO, LLS1 Pheophorbide a oxygenase, chloroplastic OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Dac_g05098 TIC55-IV,... not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g15141 TIC55-IV,... not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g06958 TIC55-IV,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g40218 TIC55-IV,... not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g06903 TIC55-IV,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g07674 TIC55-IV,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_36694 TIC55-IV,... Protochlorophyllide-dependent translocon component 52,... 0.07 OrthoFinder output from all 47 species
LOC_Os03g59120.1 TIC55-IV,... Protochlorophyllide-dependent translocon component 52,... 0.03 OrthoFinder output from all 47 species
Len_g21609 TIC55-IV,... not classified & original description: none 0.08 OrthoFinder output from all 47 species
Lfl_g06032 ACD1, PAO, LLS1 pheophorbide a oxygenase *(PAO) & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g32038 TIC55-IV,... not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g04262 TIC55-IV,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g42852 ACD1, PAO, LLS1 pheophorbide a oxygenase *(PAO) & original description: none 0.07 OrthoFinder output from all 47 species
Pir_g09573 ACD1, PAO, LLS1 pheophorbide a oxygenase *(PAO) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g62298 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pnu_g07246 TIC55-IV,... not classified & original description: none 0.07 OrthoFinder output from all 47 species
Sacu_v1.1_s0108.g020460 TIC55-IV,... not classified & original description: CDS=394-819 0.03 OrthoFinder output from all 47 species
Smo130316 TIC55-IV,... Protochlorophyllide-dependent translocon component 52,... 0.09 OrthoFinder output from all 47 species
Spa_g15132 TIC55-IV,... not classified & original description: none 0.08 OrthoFinder output from all 47 species
Spa_g19190 TIC55-IV,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g19191 TIC55-IV,... not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g08591 TIC55-IV,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e006067_P001 TIC55-IV,... Protochlorophyllide-dependent translocon component 52,... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEA Interproscan
MF GO:0051537 2 iron, 2 sulfur cluster binding IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003747 translation release factor activity IEP HCCA
BP GO:0006081 cellular aldehyde metabolic process IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006415 translational termination IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
MF GO:0008079 translation termination factor activity IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0008654 phospholipid biosynthetic process IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0009240 isopentenyl diphosphate biosynthetic process IEP HCCA
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP HCCA
MF GO:0016726 oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016854 racemase and epimerase activity IEP HCCA
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP HCCA
BP GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway IEP HCCA
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP HCCA
BP GO:0022411 cellular component disassembly IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
BP GO:0032984 protein-containing complex disassembly IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0046490 isopentenyl diphosphate metabolic process IEP HCCA
BP GO:0050992 dimethylallyl diphosphate biosynthetic process IEP HCCA
BP GO:0050993 dimethylallyl diphosphate metabolic process IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
MF GO:0051745 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR013626 PaO 309 408
IPR017941 Rieske_2Fe-2S 94 176
No external refs found!