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  5. MA_10435719g0010

MA_10435719g0010 (CPL4)


Aliases : CPL4

Description : RNA polymerase-II phosphatase. subcluster H/CPL3-4 phosphatase


Gene families : OG0001184 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001184_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10435719g0010

Target Alias Description ECC score Gene Family Method Actions
Adi_g010425 ATCPL3, CPL3 subcluster H/CPL3-4 phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Als_g13479 CPL4 subcluster H/CPL3-4 phosphatase & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.39G000800.1 ATCPL3, CPL3,... subcluster H/CPL3-4 phosphatase & original description:... 0.02 OrthoFinder output from all 47 species
Dcu_g20448 CPL4 subcluster H/CPL3-4 phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Gb_15284 ATCPL3, CPL3 subcluster H/CPL3-4 phosphatase 0.03 OrthoFinder output from all 47 species
LOC_Os11g31890.1 ATCPL3, CPL3,... subcluster H/CPL3-4 phosphatase 0.02 OrthoFinder output from all 47 species
Mp1g07910.1 CPL4 RNA polymerase-II phosphatase. subcluster H/CPL3-4 phosphatase 0.02 OrthoFinder output from all 47 species
Nbi_g03592 CPL4 subcluster H/CPL3-4 phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g11140 CPL4 subcluster H/CPL3-4 phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g16661 ATCPL3, CPL3 subcluster H/CPL3-4 phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g14476 ATCPL3, CPL3 subcluster H/CPL3-4 phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g19075 CPL4 subcluster H/CPL3-4 phosphatase & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP HCCA
CC GO:0016459 myosin complex IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0040008 regulation of growth IEP HCCA
BP GO:0045927 positive regulation of growth IEP HCCA
BP GO:0048518 positive regulation of biological process IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
InterPro domains Description Start Stop
IPR001357 BRCT_dom 430 481
IPR004274 FCP1_dom 183 339
No external refs found!