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  5. LOC_Os06g14540

LOC_Os06g14540 (Os06g0256900)


Aliases : Os06g0256900

Description : 26.3.4 misc.gluco-, galacto- and mannosidases.endoglucanase endo-1,4-beta-glucanase. Involved in cell elongation. glycosyl hydrolase 9B1 (GH9B1)


Gene families : OG_01_0000062 (Gene family) Phylogenetic Tree(s): OG0000062_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os06g14540
Cluster HCCA cluster: Cluster_78

Target Alias Description ECC score Gene Family Method Actions
AT1G02800 ATCEL2, CEL2 cellulase 2 0.06 Gene family
AT1G22880 CEL5, ATGH9B4, ATCEL5 cellulase 5 0.02 Gene family
AT1G23210 AtGH9B6, GH9B6 glycosyl hydrolase 9B6 0.03 Gene family
AT1G48930 AtGH9C1, GH9C1 glycosyl hydrolase 9C1 0.02 Gene family
AT1G64390 GH9C2, AtGH9C2 glycosyl hydrolase 9C2 0.02 Gene family
AT1G70710 CEL1, GH9B1, ATGH9B1 glycosyl hydrolase 9B1 0.03 Gene family
AT1G71380 ATGH9B3, CEL3, ATCEL3 cellulase 3 0.03 Gene family
AT2G32990 AtGH9B8, GH9B8 glycosyl hydrolase 9B8 0.02 Gene family
AT2G44570 GH9B12, AtGH9B12 glycosyl hydrolase 9B12 0.03 Gene family
AT4G11050 AtGH9C3, GH9C3 glycosyl hydrolase 9C3 0.02 Gene family
AT4G39000 GH9B17, AtGH9B17 glycosyl hydrolase 9B17 0.02 Gene family
AT4G39010 GH9B18, AtGH9B18 glycosyl hydrolase 9B18 0.02 Gene family
GSVIVT01024179001 No alias 26.3.4 misc.gluco-, galacto- and... 0.01 Gene family
GSVIVT01028042001 No alias 26.3.4 misc.gluco-, galacto- and... 0.04 Gene family
GSVIVT01037210001 No alias 10.6.1 cell wall.degradation.cellulases and beta... 0.02 Gene family
GSVIVT01037709001 No alias 10.6.1 cell wall.degradation.cellulases and beta... 0.02 Gene family
MA_132273g0020 No alias 26.3.4 misc.gluco-, galacto- and... 0.02 Gene family
MA_16152g0010 No alias 26.3.4 misc.gluco-, galacto- and... 0.04 Gene family
MA_216572g0010 No alias 26.3.4 misc.gluco-, galacto- and... 0.01 Gene family
MA_480961g0010 No alias 26.3.4 misc.gluco-, galacto- and... 0.03 Gene family
Smo144066 PACid_15415509 No description available 0.02 Gene family
Smo75214 PACid_15411249 No description available 0.02 Gene family
Smo77612 PACid_15420098 No description available 0.03 Gene family
Solyc09g010210.3.1 Solyc09g010210.3 26.3.4 misc.gluco-, galacto- and... 0.02 Gene family
Solyc09g075360.3.1 Solyc09g075360.3 26.3.4 misc.gluco-, galacto- and... 0.05 Gene family
Zm00001d009097 GRMZM2G331566 26.3.4 misc.gluco-, galacto- and... 0.12 Gene family
Zm00001d010446 GRMZM2G143747 26.3.4 misc.gluco-, galacto- and... 0.02 Gene family
Zm00001d015067 GRMZM2G141911 26.3.4 misc.gluco-, galacto- and... 0.02 Gene family
Zm00001d017949 GRMZM2G076049 26.3.4 misc.gluco-, galacto- and... 0.13 Gene family
Zm00001d025475 GRMZM2G125436 26.3.4 misc.gluco-, galacto- and... 0.03 Gene family
Zm00001d035082 GRMZM2G009025 26.3.4 misc.gluco-, galacto- and... 0.07 Gene family
Zm00001d037338 GRMZM2G455642 26.3.4 misc.gluco-, galacto- and... 0.1 Gene family
Zm00001d051814 GRMZM2G125991 10.6.1 cell wall.degradation.cellulases and beta... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA InterProScan
BP GO:0005975 carbohydrate metabolic process IEA InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001701 Glyco_hydro_9 25 480
No external refs found!