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  5. MA_10435407g0010

MA_10435407g0010 (EIF4E, CUM1, AT.EIF4E1, eIF4E1)


Aliases : EIF4E, CUM1, AT.EIF4E1, eIF4E1

Description : component eIF4E of eIF4F mRNA unwinding complex. component eIF-iso4E of eIF-iso4F unwinding complex


Gene families : OG0001969 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001969_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10435407g0010
Cluster HCCA: Cluster_13

Target Alias Description ECC score Gene Family Method Actions
AT1G29550 No alias Eukaryotic initiation factor 4E protein 0.03 OrthoFinder output from all 47 species
Adi_g011317 EIF4E, CUM1,... component *(eIF-iso4E) of eIF-iso4F unwinding complex &... 0.02 OrthoFinder output from all 47 species
Als_g17610 EIF4E, CUM1,... component *(eIF-iso4E) of eIF-iso4F unwinding complex &... 0.03 OrthoFinder output from all 47 species
Azfi_s0368.g067043 EIF4E, CUM1,... not classified & original description: CDS=117-755 0.03 OrthoFinder output from all 47 species
GSVIVT01027903001 LSP, LSP1,... Protein biosynthesis.translation initiation.mRNA... 0.03 OrthoFinder output from all 47 species
Zm00001e018268_P001 EIF4E, CUM1,... component eIF4E of eIF4F mRNA unwinding complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0003743 translation initiation factor activity IEA Interproscan
BP GO:0006413 translational initiation IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
CC GO:0030532 small nuclear ribonucleoprotein complex IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
CC GO:0046540 U4/U6 x U5 tri-snRNP complex IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0070070 proton-transporting V-type ATPase complex assembly IEP HCCA
BP GO:0070071 proton-transporting two-sector ATPase complex assembly IEP HCCA
BP GO:0070072 vacuolar proton-transporting V-type ATPase complex assembly IEP HCCA
CC GO:0097525 spliceosomal snRNP complex IEP HCCA
CC GO:0097526 spliceosomal tri-snRNP complex IEP HCCA
CC GO:0120114 Sm-like protein family complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR001040 TIF_eIF_4E 42 171
No external refs found!