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MA_10435174g0010


Description : Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis thaliana (sp|q9asp6|hnrpq_arath : 318.0)


Gene families : OG0002016 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002016_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10435174g0010

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00018p00254940 evm_27.TU.AmTr_v1... Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AMTR_s00031p00165100 evm_27.TU.AmTr_v1... Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT4G00830 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.03 OrthoFinder output from all 47 species
Adi_g109709 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g09722 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g00675 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g07964 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0390.g067701 No alias not classified & original description: CDS=204-1688 0.03 OrthoFinder output from all 47 species
Ceric.02G039700.1 Ceric.02G039700 not classified & original description: pacid=50586014... 0.04 OrthoFinder output from all 47 species
Dcu_g12056 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g12057 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01036119001 No alias Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_14828 No alias Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os10g06130.1 LOC_Os10g06130 Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
LOC_Os11g14430.2 LOC_Os11g14430 Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Ore_g28051 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g03402 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g57087 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0045.g013261 No alias not classified & original description: CDS=1-1635 0.02 OrthoFinder output from all 47 species
Sam_g28280 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc09g009890.4.1 Solyc09g009890 Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc10g009220.3.1 Solyc10g009220 Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Spa_g06606 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e021852_P001 Zm00001e021852 Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 131 198
IPR000504 RRM_dom 208 274
IPR000504 RRM_dom 299 368
No external refs found!