MA_10434639g0010


Description : Stem-specific protein TSJT1 OS=Nicotiana tabacum (sp|p24805|tsjt1_tobac : 132.0)


Gene families : OG0000573 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000573_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10434639g0010
Cluster HCCA: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00005p00269560 ATAILP1, AILP1,... Stem-specific protein TSJT1 OS=Nicotiana tabacum 0.03 OrthoFinder output from all 47 species
AMTR_s00009p00267130 evm_27.TU.AmTr_v1... Stem-specific protein TSJT1 OS=Nicotiana tabacum 0.03 OrthoFinder output from all 47 species
AMTR_s00025p00066790 ATAILP1, AILP1,... Stem-specific protein TSJT1 OS=Nicotiana tabacum 0.02 OrthoFinder output from all 47 species
AT5G19140 ATAILP1, AILP1 Aluminium induced protein with YGL and LRDR motifs 0.03 OrthoFinder output from all 47 species
Aev_g21011 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g01268 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0174.g055900 No alias not classified & original description: CDS=333-1163 0.03 OrthoFinder output from all 47 species
Cba_g13395 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.04G004200.1 ATAILP1, AILP1,... not classified & original description: pacid=50630154... 0.04 OrthoFinder output from all 47 species
Ceric.04G004300.1 Ceric.04G004300 not classified & original description: pacid=50631114... 0.03 OrthoFinder output from all 47 species
Ceric.37G070600.1 Ceric.37G070600 not classified & original description: pacid=50615522... 0.05 OrthoFinder output from all 47 species
Ehy_g06499 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g23716 ATAILP1, AILP1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01002031001 No alias Stem-specific protein TSJT1 OS=Nicotiana tabacum 0.06 OrthoFinder output from all 47 species
GSVIVT01014386001 No alias Stem-specific protein TSJT1 OS=Nicotiana tabacum 0.04 OrthoFinder output from all 47 species
LOC_Os04g58280.2 LOC_Os04g58280 Stem-specific protein TSJT1 OS=Nicotiana tabacum... 0.02 OrthoFinder output from all 47 species
Lfl_g28509 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_109804g0010 No alias Stem-specific protein TSJT1 OS=Nicotiana tabacum... 0.04 OrthoFinder output from all 47 species
Mp7g03680.1 No alias Stem-specific protein TSJT1 OS=Nicotiana tabacum... 0.02 OrthoFinder output from all 47 species
Nbi_g18276 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g11326 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g01543 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g11778 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g28867 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g078380.3.1 Solyc02g078380 Stem-specific protein TSJT1 OS=Nicotiana tabacum... 0.04 OrthoFinder output from all 47 species
Solyc03g006490.3.1 Solyc03g006490 Stem-specific protein TSJT1 OS=Nicotiana tabacum... 0.03 OrthoFinder output from all 47 species
Spa_g24562 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g38350 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g46909 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
InterPro domains Description Start Stop
IPR024286 DUF3700 2 182
No external refs found!