MA_10434449g0010

Description : helicase Prp43 of Intron-Lariat Spliceosome complex

Gene families : OG0000184 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000184_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: MA_10434449g0010

Target	Alias	Description	ECC score	Gene Family Method
AT1G26370	No alias	RNA helicase family protein	0.02	OrthoFinder output from all 47 species
Aev_g11422	No alias	RNA helicase *(Prp22) & original description: none	0.01	OrthoFinder output from all 47 species
Als_g01897	No alias	RNA helicase *(Prp22) & original description: none	0.01	OrthoFinder output from all 47 species
Als_g23007	No alias	RNA helicase Prp43 of Intron-Lariat Spliceosome complex...	0.03	OrthoFinder output from all 47 species
Aop_g07221	No alias	RNA helicase Prp43 of Intron-Lariat Spliceosome complex...	0.03	OrthoFinder output from all 47 species
Ceric.34G065000.1	Ceric.34G065000	not classified & original description: pacid=50623415...	0.02	OrthoFinder output from all 47 species
Ehy_g18759	No alias	RNA helicase Prp43 of Intron-Lariat Spliceosome complex...	0.02	OrthoFinder output from all 47 species
Lfl_g03223	No alias	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Mp4g02780.1	No alias	Probable pre-mRNA-splicing factor ATP-dependent RNA...	0.01	OrthoFinder output from all 47 species
Pir_g18506	ESP3, EMB2733	RNA helicase *(Prp2) & original description: none	0.01	OrthoFinder output from all 47 species
Spa_g22116	ESP3, EMB2733	RNA helicase *(Prp2) & original description: none	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004386	helicase activity	IEA	Interproscan
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended
MF	GO:0140657	ATP-dependent activity	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR007502	Helicase-assoc_dom	374	462
IPR001650	Helicase_C	174	311
IPR011709	DEAD-box_helicase_OB_fold	524	600

External Links

No external refs found!