Aliases : SHP2, AGL5
Description : transcription factor (MADS/AGL)
Gene families : OG0000022 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Als_g11010 | AGL16 | MADS/AGL-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Aspi01Gene62317.t1 | ANR1, AGL44,... | MADS/AGL-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
MA_113509g0010 | AGL104 | transcription factor (MADS/AGL) | 0.04 | OrthoFinder output from all 47 species | |
MA_130755g0010 | AGL10, CAL1, CAL | transcription factor (MADS/AGL) | 0.05 | OrthoFinder output from all 47 species | |
MA_1767g0010 | AGL66 | transcription factor (MADS/AGL) | 0.05 | OrthoFinder output from all 47 species | |
Ore_g42894 | AGL17 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Solyc07g150138.1.1 | Solyc07g150138 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
Spa_g44282 | AGL3, SEP4 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | Interproscan |
MF | GO:0046983 | protein dimerization activity | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000786 | nucleosome | IEP | HCCA |
CC | GO:0032991 | protein-containing complex | IEP | HCCA |
CC | GO:0032993 | protein-DNA complex | IEP | HCCA |
CC | GO:0044815 | DNA packaging complex | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002100 | TF_MADSbox | 3 | 50 |
No external refs found! |