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  5. MA_10433804g0010

MA_10433804g0010


Description : component U1C of U1 small nuclear ribonucleoprotein particle (snRNP)


Gene families : OG0002867 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002867_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10433804g0010

Target Alias Description ECC score Gene Family Method Actions
Ala_g09085 No alias component *(U1C) of U1 snRNP complex & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g16212 No alias component *(U1C) of U1 snRNP complex & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g24095 No alias component *(U1C) of U1 snRNP complex & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g06327 No alias component *(U1C) of U1 snRNP complex & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g29133 No alias component *(U1C) of U1 snRNP complex & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR013085 U1-CZ_Znf_C2H2 2 39
No external refs found!