1. Home
  2. Species
  3. Picea abies
  4. Sequence
  5. MA_10433770g0010

MA_10433770g0010


Description : protein factor (USP39) of U4/U6 U5 small nuclear ribonucleoprotein particle (snRNP)


Gene families : OG0005722 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005722_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10433770g0010

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene01393.t1 Aspi01Gene01393 component *(USP39) of U4/U6.U5 tri-snRNP complex &... 0.02 OrthoFinder output from all 47 species
Ehy_g01410 No alias component *(USP39) of U4/U6.U5 tri-snRNP complex &... 0.02 OrthoFinder output from all 47 species
Lfl_g16704 No alias component *(USP39) of U4/U6.U5 tri-snRNP complex &... 0.02 OrthoFinder output from all 47 species
Mp1g24510.1 No alias protein factor (USP39) of U4/U6 U5 small nuclear... 0.02 OrthoFinder output from all 47 species
Sam_g07115 No alias component *(USP39) of U4/U6.U5 tri-snRNP complex &... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0016579 protein deubiquitination IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004399 histidinol dehydrogenase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006367 transcription initiation at RNA polymerase II promoter IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006547 histidine metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001394 Peptidase_C19_UCH 53 384
No external refs found!