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  5. MA_10433679g0010

MA_10433679g0010 (RDO4, HUB1)


Aliases : RDO4, HUB1

Description : RING-HC-class E3 ligase


Gene families : OG0001584 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001584_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10433679g0010
Cluster HCCA: Cluster_44

Target Alias Description ECC score Gene Family Method Actions
Adi_g059356 RDO4, HUB1 E3 ubiquitin ligase *(HUB) & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g088508 RDO4, HUB1 E3 ubiquitin ligase *(HUB) & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g20568 HUB2 E3 ubiquitin ligase *(HUB) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g13983 HUB2 E3 ubiquitin ligase *(HUB) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g01150 HUB2 E3 ubiquitin ligase *(HUB) & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g02332 HUB2 E3 ubiquitin ligase *(HUB) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g09718 RDO4, HUB1 E3 ubiquitin ligase *(HUB) & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0079.g038425 HUB2 E3 ubiquitin ligase *(HUB) & original description: CDS=1-2559 0.02 OrthoFinder output from all 47 species
Ceric.14G031800.1 RDO4, HUB1,... E3 ubiquitin ligase *(HUB) & original description:... 0.06 OrthoFinder output from all 47 species
Ceric.21G031900.1 HUB2, Ceric.21G031900 E3 ubiquitin ligase *(HUB) & original description:... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000169.18 HUB2 Protein degradation.peptide tagging.Ubiquitin... 0.01 OrthoFinder output from all 47 species
Cre14.g625802 No alias Protein degradation.peptide tagging.Ubiquitin... 0.01 OrthoFinder output from all 47 species
Dac_g20436 HUB2 E3 ubiquitin ligase *(HUB) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g04109 HUB2 E3 ubiquitin ligase *(HUB) & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g25476 HUB2 E3 ubiquitin ligase *(HUB) & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os04g46450.1 RDO4, HUB1,... RING-HC-class E3 ligase 0.02 OrthoFinder output from all 47 species
Lfl_g11288 HUB2 E3 ubiquitin ligase *(HUB) & original description: none 0.02 OrthoFinder output from all 47 species
MA_10430809g0020 HUB2 RING-HC-class E3 ligase 0.06 OrthoFinder output from all 47 species
Pir_g10428 RDO4, HUB1 E3 ubiquitin ligase *(HUB) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g39725 HUB2 E3 ubiquitin ligase *(HUB) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g01320 HUB2 E3 ubiquitin ligase *(HUB) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g07599 HUB2 E3 ubiquitin ligase *(HUB) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g12359 No alias E3 ubiquitin ligase *(HUB) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g35279 No alias E3 ubiquitin ligase *(HUB) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g36535 No alias E3 ubiquitin ligase *(HUB) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g08099 HUB2 E3 ubiquitin ligase *(HUB) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06090 HUB2 E3 ubiquiTin ligase *(HUB) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g15227 RDO4, HUB1 E3 ubiquiTin ligase *(HUB) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!