MA_10433640g0010


Description : KH domain-containing protein At4g18375 OS=Arabidopsis thaliana (sp|p58223|y4837_arath : 94.7)


Gene families : OG0000185 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000185_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10433640g0010

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00092p00116010 evm_27.TU.AmTr_v1... KH domain-containing protein At4g18375 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT2G03110 No alias RNA binding;nucleic acid binding 0.03 OrthoFinder output from all 47 species
Adi_g006607 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g010493 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g022420 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g024339 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g074054 HEN4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g03920 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g07964 No alias regulatory protein *(RCF3) of HYL1-phosphorylation &... 0.02 OrthoFinder output from all 47 species
Aev_g11460 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g14393 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g09715 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g15857 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05589 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07063 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g08517 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g19267 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g21439 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g04310 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g06699 No alias regulatory protein *(RCF3) of HYL1-phosphorylation &... 0.04 OrthoFinder output from all 47 species
Aob_g17355 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g19887 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g29218 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g62599 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene06312.t1 Aspi01Gene06312 regulatory protein *(RCF3) of HYL1-phosphorylation &... 0.04 OrthoFinder output from all 47 species
Aspi01Gene68976.t1 Aspi01Gene68976 regulatory protein *(RCF3) of HYL1-phosphorylation &... 0.04 OrthoFinder output from all 47 species
Azfi_s0194.g057204 No alias regulatory protein *(RCF3) of HYL1-phosphorylation &... 0.03 OrthoFinder output from all 47 species
Azfi_s0280.g062273 No alias not classified & original description: CDS=315-2570 0.03 OrthoFinder output from all 47 species
Cba_g03276 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g06665 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g07339 HEN4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g12024 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g17642 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g24288 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g71670 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.02G052900.1 Ceric.02G052900 not classified & original description: pacid=50583938... 0.02 OrthoFinder output from all 47 species
Ceric.14G007100.1 Ceric.14G007100 not classified & original description: pacid=50632910... 0.03 OrthoFinder output from all 47 species
Ceric.14G023600.1 Ceric.14G023600 not classified & original description: pacid=50632924... 0.03 OrthoFinder output from all 47 species
Ceric.25G027100.1 Ceric.25G027100 not classified & original description: pacid=50594480... 0.02 OrthoFinder output from all 47 species
Ceric.32G061200.1 Ceric.32G061200 not classified & original description: pacid=50597564... 0.03 OrthoFinder output from all 47 species
Dac_g16018 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g10791 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g12387 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g12897 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g24061 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g02923 No alias regulatory protein *(RCF3) of HYL1-phosphorylation &... 0.02 OrthoFinder output from all 47 species
Dde_g11109 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g04903 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g09896 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g18057 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01031037001 No alias KH domain-containing protein At4g18375 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01038571001 No alias RNA-binding KH domain-containing protein RCF3... 0.03 OrthoFinder output from all 47 species
Gb_18830 No alias RNA-binding KH domain-containing protein RCF3... 0.04 OrthoFinder output from all 47 species
Gb_31686 No alias RNA-binding KH domain-containing protein RCF3... 0.03 OrthoFinder output from all 47 species
Len_g07805 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g03080 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g04773 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g04900 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g10062 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g10485 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g32267 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g11897 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g11925 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g34355 No alias regulatory protein *(RCF3) of HYL1-phosphorylation &... 0.05 OrthoFinder output from all 47 species
Ore_g03833 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g04462 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g05810 No alias regulatory protein *(RCF3) of HYL1-phosphorylation &... 0.02 OrthoFinder output from all 47 species
Ore_g06520 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g09995 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g10011 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g15528 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g18548 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g21139 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g25271 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g40850 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g09567 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g10935 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g05936 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g09732 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g12959 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g13999 No alias regulatory protein *(RCF3) of HYL1-phosphorylation &... 0.03 OrthoFinder output from all 47 species
Pnu_g30289 No alias regulatory protein *(RCF3) of HYL1-phosphorylation &... 0.02 OrthoFinder output from all 47 species
Ppi_g01057 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06368 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0059.g015180 No alias E3 ubiquitin ligase *(STUBL1/3) & original description:... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0099.g019575 No alias not classified & original description: CDS=226-2445 0.03 OrthoFinder output from all 47 species
Sam_g08472 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g13844 No alias regulatory protein *(RCF3) of HYL1-phosphorylation &... 0.02 OrthoFinder output from all 47 species
Sam_g16383 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g106020.3.1 HEN4, Solyc01g106020 RNA-binding KH domain-containing protein RCF3... 0.04 OrthoFinder output from all 47 species
Solyc02g067210.3.1 Solyc02g067210 KH domain-containing protein At4g18375 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Solyc03g034200.3.1 Solyc03g034200 RNA-binding KH domain-containing protein RCF3... 0.05 OrthoFinder output from all 47 species
Solyc08g048500.3.1 Solyc08g048500 KH domain-containing protein At4g18375 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Solyc12g055780.3.1 Solyc12g055780 RNA-binding KH domain-containing protein RCF3... 0.04 OrthoFinder output from all 47 species
Spa_g05211 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g22547 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g53383 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g02804 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g09067 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g10773 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e004486_P005 Zm00001e004486 KH domain-containing protein At4g18375 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Zm00001e026127_P004 Zm00001e026127 RNA-binding KH domain-containing protein RCF3... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0006396 RNA processing IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
InterPro domains Description Start Stop
IPR004088 KH_dom_type_1 148 216
IPR004088 KH_dom_type_1 41 94
No external refs found!