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  5. MA_10433402g0010

MA_10433402g0010 (ABO5)


Aliases : ABO5

Description : ABO5 mitochondrial RNA splicing factor


Gene families : OG0005617 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005617_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10433402g0010

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00061p00191420 ABO5,... RNA processing.organelle machineries.RNA... 0.02 OrthoFinder output from all 47 species
Adi_g055882 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g56987 No alias mitochondrial RNA splicing factor *(ABO5) & original... 0.03 OrthoFinder output from all 47 species
Aop_g09293 No alias mitochondrial RNA splicing factor *(ABO5) & original... 0.02 OrthoFinder output from all 47 species
Azfi_s0080.g038478 No alias mitochondrial RNA splicing factor *(ABO5) & original... 0.02 OrthoFinder output from all 47 species
Cba_g04670 No alias mitochondrial RNA splicing factor *(ABO5) & original... 0.03 OrthoFinder output from all 47 species
Ceric.08G062900.1 Ceric.08G062900 mitochondrial RNA splicing factor *(ABO5) & original... 0.03 OrthoFinder output from all 47 species
Dac_g45786 No alias mitochondrial RNA splicing factor *(ABO5) & original... 0.03 OrthoFinder output from all 47 species
Dcu_g11869 No alias mitochondrial RNA splicing factor *(ABO5) & original... 0.03 OrthoFinder output from all 47 species
Ehy_g12116 No alias mitochondrial RNA splicing factor *(ABO5) & original... 0.03 OrthoFinder output from all 47 species
Gb_30527 ABO5 ABO5 mitochondrial RNA splicing factor 0.05 OrthoFinder output from all 47 species
LOC_Os02g13340.1 ABO5, LOC_Os02g13340 ABO5 mitochondrial RNA splicing factor 0.02 OrthoFinder output from all 47 species
MA_90107g0010 No alias Pentatricopeptide repeat-containing protein At1g05600... 0.04 OrthoFinder output from all 47 species
Tin_g26992 No alias mitochondrial RNA splicing factor *(ABO5) & original... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003678 DNA helicase activity IEP HCCA
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP HCCA
BP GO:0006783 heme biosynthetic process IEP HCCA
BP GO:0006784 heme A biosynthetic process IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0042168 heme metabolic process IEP HCCA
BP GO:0042440 pigment metabolic process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0046148 pigment biosynthetic process IEP HCCA
BP GO:0046160 heme a metabolic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 228 257
IPR002885 Pentatricopeptide_repeat 157 199
IPR002885 Pentatricopeptide_repeat 466 514
IPR002885 Pentatricopeptide_repeat 536 583
IPR002885 Pentatricopeptide_repeat 398 444
IPR002885 Pentatricopeptide_repeat 330 378
IPR002885 Pentatricopeptide_repeat 261 307
No external refs found!