LOC_Os06g12060 (Os06g0224500, Os06g0224650)

Aliases : Os06g0224500, Os06g0224650

Description : 27.3.99 RNA.regulation of transcription.unclassified Mitochondrial transcription termination factor family protein

Gene families : OG_01_0000060 (Gene family) Phylogenetic Tree(s): OG0000060_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR network (cutoff 100): LOC_Os06g12060
Cluster	HCCA cluster: Cluster_199

Target	Alias	Description	ECC score	Gene Family Method
AT1G21150	No alias	Mitochondrial transcription termination factor family protein	0.02	Gene family
AT1G62110	No alias	Mitochondrial transcription termination factor family protein	0.02	Gene family
AT1G62120	No alias	Mitochondrial transcription termination factor family protein	0.03	Gene family
AT1G62150	No alias	Mitochondrial transcription termination factor family protein	0.03	Gene family
AT1G79220	No alias	Mitochondrial transcription termination factor family protein	0.02	Gene family
GSVIVT01028383001	No alias	27.3.99 RNA.regulation of transcription.unclassified...	0.02	Gene family
MA_10433924g0010	No alias	27.3.99 RNA.regulation of transcription.unclassified...	0.01	Gene family
MA_10435408g0010	No alias	27.3.99 RNA.regulation of transcription.unclassified...	0.01	Gene family
Solyc04g072550.2.1	Solyc04g072550.2	27.3.99 RNA.regulation of transcription.unclassified...	0.04	Gene family
Zm00001d010329	GRMZM2G325350	27.3.99 RNA.regulation of transcription.unclassified...	0.02	Gene family

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003690	double-stranded DNA binding	IEA	InterProScan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003690	MTERF	249	343
IPR003690	MTERF	84	303
IPR003690	MTERF	564	824

External Links

No external refs found!

LOC_Os06g12060 (Os06g0224500, Os06g0224650)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation