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  5. MA_10433238g0010

MA_10433238g0010 (PARL1, ATNUC-L1, NUC-L1)


Aliases : PARL1, ATNUC-L1, NUC-L1

Description : rDNA chromatin transcription factor (NCL)


Gene families : OG0001950 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001950_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10433238g0010

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00092p00090110 PARL1, ATNUC-L1,... RNA biosynthesis.rRNA biogenesis.Nucleolin rDNA... 0.05 OrthoFinder output from all 47 species
AT1G48920 PARL1, ATNUC-L1, NUC-L1 nucleolin like 1 0.07 OrthoFinder output from all 47 species
Aev_g38951 PARL1, ATNUC-L1, NUC-L1 regulatory protein *(NCL) of rRNA transcription &... 0.02 OrthoFinder output from all 47 species
Als_g63112 PARL1, ATNUC-L1, NUC-L1 regulatory protein *(NCL) of rRNA transcription &... 0.02 OrthoFinder output from all 47 species
Aob_g21865 PARL1, ATNUC-L1, NUC-L1 regulatory protein *(NCL) of rRNA transcription &... 0.03 OrthoFinder output from all 47 species
Aop_g12627 PARLL1, NUC-L2, ATNUC-L2 regulatory protein *(NCL) of rRNA transcription &... 0.03 OrthoFinder output from all 47 species
Aop_g39120 PARL1, ATNUC-L1, NUC-L1 regulatory protein *(NCL) of rRNA transcription &... 0.03 OrthoFinder output from all 47 species
Cba_g15225 PARL1, ATNUC-L1, NUC-L1 regulatory protein *(NCL) of rRNA transcription &... 0.04 OrthoFinder output from all 47 species
Ceric.05G016700.1 PARLL1, NUC-L2,... regulatory protein *(NCL) of rRNA transcription &... 0.05 OrthoFinder output from all 47 species
Ceric.13G070500.1 PARLL1, NUC-L2,... regulatory protein *(NCL) of rRNA transcription &... 0.04 OrthoFinder output from all 47 species
Ceric.15G060200.1 PARL1, ATNUC-L1,... regulatory protein *(NCL) of rRNA transcription &... 0.08 OrthoFinder output from all 47 species
Dac_g08175 PARL1, ATNUC-L1, NUC-L1 regulatory protein *(NCL) of rRNA transcription &... 0.03 OrthoFinder output from all 47 species
Dac_g45859 PARL1, ATNUC-L1, NUC-L1 regulatory protein *(NCL) of rRNA transcription &... 0.02 OrthoFinder output from all 47 species
Dcu_g32133 PARL1, ATNUC-L1, NUC-L1 regulatory protein *(NCL) of rRNA transcription &... 0.02 OrthoFinder output from all 47 species
Ehy_g13607 PARL1, ATNUC-L1, NUC-L1 regulatory protein *(NCL) of rRNA transcription &... 0.03 OrthoFinder output from all 47 species
GSVIVT01012042001 PARLL1, NUC-L2, ATNUC-L2 RNA biosynthesis.rRNA biogenesis.Nucleolin rDNA... 0.04 OrthoFinder output from all 47 species
LOC_Os04g52960.1 PARL1, ATNUC-L1,... rDNA chromatin transcription factor (NCL) 0.04 OrthoFinder output from all 47 species
LOC_Os08g09350.1 PARL1, ATNUC-L1,... rDNA chromatin transcription factor (NCL) 0.05 OrthoFinder output from all 47 species
Len_g19210 PARL1, ATNUC-L1, NUC-L1 regulatory protein *(NCL) of rRNA transcription &... 0.04 OrthoFinder output from all 47 species
Len_g47362 PARLL1, NUC-L2, ATNUC-L2 regulatory protein *(NCL) of rRNA transcription &... 0.04 OrthoFinder output from all 47 species
Lfl_g36622 PARL1, ATNUC-L1, NUC-L1 regulatory protein *(NCL) of rRNA transcription &... 0.02 OrthoFinder output from all 47 species
Ppi_g42600 PARLL1, NUC-L2, ATNUC-L2 regulatory protein *(NCL) of rRNA transcription &... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0023.g008790 PARL1, ATNUC-L1, NUC-L1 regulatory protein *(NCL) of rRNA transcription &... 0.02 OrthoFinder output from all 47 species
Sam_g15345 No alias regulatory protein *(NCL) of rRNA transcription &... 0.02 OrthoFinder output from all 47 species
Sam_g15346 No alias regulatory protein *(NCL) of rRNA transcription &... 0.02 OrthoFinder output from all 47 species
Smo234317 PARL1, ATNUC-L1, NUC-L1 RNA biosynthesis.rRNA biogenesis.Nucleolin rDNA... 0.03 OrthoFinder output from all 47 species
Solyc02g014310.4.1 PARL1, ATNUC-L1,... rDNA chromatin transcription factor (NCL) 0.06 OrthoFinder output from all 47 species
Spa_g26094 PARLL1, NUC-L2, ATNUC-L2 regulatory protein *(NCL) of rRNA transcription &... 0.03 OrthoFinder output from all 47 species
Tin_g09738 PARL1, ATNUC-L1, NUC-L1 regulatory protein *(NCL) of rRNA transcription &... 0.05 OrthoFinder output from all 47 species
Zm00001e004617_P003 PARL1, ATNUC-L1,... rDNA chromatin transcription factor (NCL) 0.07 OrthoFinder output from all 47 species
Zm00001e021609_P004 PARL1, ATNUC-L1,... rDNA chromatin transcription factor (NCL) 0.11 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003678 DNA helicase activity IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 320 387
IPR000504 RRM_dom 419 481
No external refs found!