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  5. MA_10433221g0010

MA_10433221g0010 (RDO4, HUB1)


Aliases : RDO4, HUB1

Description : RING-HC-class E3 ligase


Gene families : OG0001584 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001584_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10433221g0010

Target Alias Description ECC score Gene Family Method Actions
Adi_g059356 RDO4, HUB1 E3 ubiquitin ligase *(HUB) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g088508 RDO4, HUB1 E3 ubiquitin ligase *(HUB) & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g20568 HUB2 E3 ubiquitin ligase *(HUB) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g02332 HUB2 E3 ubiquitin ligase *(HUB) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g32079 HUB2 E3 ubiquitin ligase *(HUB) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.14G031800.1 RDO4, HUB1,... E3 ubiquitin ligase *(HUB) & original description:... 0.02 OrthoFinder output from all 47 species
Dac_g03836 RDO4, HUB1 E3 ubiquitin ligase *(HUB) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g04109 HUB2 E3 ubiquitin ligase *(HUB) & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g25476 HUB2 E3 ubiquitin ligase *(HUB) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01018223001 RDO4, HUB1 Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
MA_164157g0010 HUB2 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp6g03540.1 RDO4, HUB1 RING-HC-class E3 ligase 0.02 OrthoFinder output from all 47 species
Pir_g39725 HUB2 E3 ubiquitin ligase *(HUB) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g06419 HUB2 E3 ubiquitin ligase *(HUB) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g01320 HUB2 E3 ubiquitin ligase *(HUB) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g07599 HUB2 E3 ubiquitin ligase *(HUB) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g12359 No alias E3 ubiquitin ligase *(HUB) & original description: none 0.02 OrthoFinder output from all 47 species
Smo175555 HUB2 Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
Spa_g12693 HUB2 E3 ubiquitin ligase *(HUB) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e001968_P003 HUB2, Zm00001e001968 RING-HC-class E3 ligase 0.03 OrthoFinder output from all 47 species
Zm00001e013143_P005 RDO4, HUB1,... RING-HC-class E3 ligase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!