LOC_Os06g11860 (Os06g0222400)


Aliases : Os06g0222400

Description : 27.3.3 RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family Encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family (RAP2.4). The protein


Gene families : OG_01_0000000 (Gene family) Phylogenetic Tree(s): OG0000000_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os06g11860
Cluster HCCA cluster: Cluster_333

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01032983001 No alias No description available 0.01 Gene family
MA_23847g0010 No alias No description available 0.04 Gene family
Solyc01g090320.3.1 Solyc01g090320.3 No description available 0.05 Gene family
Solyc01g090340.2.1 Solyc01g090340.2 No description available 0.03 Gene family
Solyc01g090370.2.1 Solyc01g090370.2 No description available 0.02 Gene family
Solyc03g005500.1.1 Solyc03g005500.1 No description available 0.02 Gene family
Solyc03g005520.1.1 Solyc03g005520.1 No description available 0.03 Gene family
Solyc04g007170.3.1 Solyc04g007170.3 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.06 Gene family
Solyc08g078180.1.1 Solyc08g078180.1 No description available 0.01 Gene family
Solyc09g066350.1.1 Solyc09g066350.1 No description available 0.03 Gene family
Zm00001d002079 GRMZM2G174917 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Zm00001d029884 GRMZM5G806839 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.08 Gene family
Zm00001d052026 GRMZM2G111415 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 183 231
No external refs found!