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Aliases : PUB22
Description : E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis thaliana (sp|q84tg3|pub23_arath : 139.0)
Gene families : OG0000127 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000127_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00001p00199950 | evm_27.TU.AmTr_v1... | U-box domain-containing protein 31 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00030p00130440 | CMPG2, ATCMPG2,... | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00030p00159240 | PUB23,... | E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
| AT1G66160 | CMPG1, ATCMPG1 | CYS, MET, PRO, and GLY protein 1 | 0.02 | OrthoFinder output from all 47 species | |
| AT2G35930 | PUB23 | plant U-box 23 | 0.03 | OrthoFinder output from all 47 species | |
| AT3G11840 | PUB24 | plant U-box 24 | 0.04 | OrthoFinder output from all 47 species | |
| AT3G18710 | PUB29, ATPUB29 | plant U-box 29 | 0.04 | OrthoFinder output from all 47 species | |
| AT3G19380 | PUB25 | plant U-box 25 | 0.05 | OrthoFinder output from all 47 species | |
| AT3G52450 | PUB22 | plant U-box 22 | 0.04 | OrthoFinder output from all 47 species | |
| AT5G37490 | No alias | ARM repeat superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g003285 | PUB25 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g077173 | PUB25 | U-Box-group-III E3 ubiquitin ligase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g02974 | PUB23 | E3 ubiquitin ligase & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Aev_g09134 | PUB25 | E3 ubiquitin ligase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g16119 | PUB25 | E3 ubiquitin ligase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aev_g18167 | PUB26 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g21197 | PUB25 | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Aev_g38062 | PUB25 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ala_g20026 | PUB26 | U-Box-group-III E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g10929 | PUB26 | U-Box-group-III E3 ubiquitin ligase & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Als_g11423 | PUB15 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g12714 | PUB25 | U-Box-group-III E3 ubiquitin ligase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g23185 | CMPG1, ATCMPG1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g40105 | PUB26 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g57047 | PUB23 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g60936 | PUB25 | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g62359 | PUB26 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g04774 | PUB25 | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g18761 | PUB29, ATPUB29 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene15171.t1 | PUB29, ATPUB29,... | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene18452.t1 | PUB25, Aspi01Gene18452 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene18453.t1 | PUB25, Aspi01Gene18453 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene18467.t1 | PUB23, Aspi01Gene18467 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene19337.t1 | PUB26, Aspi01Gene19337 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene19350.t1 | PUB26, Aspi01Gene19350 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene19351.t1 | Aspi01Gene19351 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene19374.t1 | Aspi01Gene19374 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene22942.t1 | PUB26, Aspi01Gene22942 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene27391.t1 | PUB26, Aspi01Gene27391 | U-Box-group-III E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene33499.t1 | PUB25, Aspi01Gene33499 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene39077.t2 | Aspi01Gene39077 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene44311.t1 | PUB22, Aspi01Gene44311 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene44325.t1 | PUB23, Aspi01Gene44325 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene44326.t1 | PUB23, Aspi01Gene44326 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene44809.t1 | PUB25, Aspi01Gene44809 | U-Box-group-III E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene51615.t1 | PUB15, Aspi01Gene51615 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene51624.t1 | PUB15, Aspi01Gene51624 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene60604.t1 | PUB26, Aspi01Gene60604 | U-Box-group-III E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene71357.t1 | PUB25, Aspi01Gene71357 | E3 ubiquitin ligase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g56659 | PUB26 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g78214 | PUB25 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.07G004600.1 | PUB26, Ceric.07G004600 | E3 ubiquitin ligase & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.08G065500.1 | PUB26, Ceric.08G065500 | U-Box-group-III E3 ubiquitin ligase & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.10G007700.1 | PUB23, Ceric.10G007700 | not classified & original description: pacid=50612519... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.19G059800.1 | PUB26, Ceric.19G059800 | not classified & original description: pacid=50575490... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.1Z056500.1 | PUB26, Ceric.1Z056500 | U-Box-group-III E3 ubiquitin ligase & original... | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g01209 | PUB23 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g01521 | PUB8, B80 | E3 ubiquitin ligase *(PUB8) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g04516 | PUB23 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g07421 | PUB23 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g11691 | PUB26 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g18955 | PUB26 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g26825 | PUB26 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g31575 | No alias | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g38952 | PUB26 | U-Box-group-III E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g01464 | PUB26 | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g24916 | PUB25 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g21913 | PUB26 | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| GSVIVT01011139001 | PUB23 | E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01011140001 | PUB23 | E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01011616001 | CMPG1, ATCMPG1 | U-box domain-containing protein 20 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01026542001 | CMPG2, ATCMPG2 | U-box domain-containing protein 27 OS=Arabidopsis thaliana | 0.07 | OrthoFinder output from all 47 species | |
| GSVIVT01026764001 | PUB22 | E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis thaliana | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01031720001 | PUB26 | U-box domain-containing protein 26 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| Gb_16228 | No alias | U-box domain-containing protein 21 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_17119 | PUB22 | E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_19502 | PUB23 | U-box domain-containing protein 25 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_27794 | No alias | U-box domain-containing protein 21 OS=Arabidopsis... | 0.05 | OrthoFinder output from all 47 species | |
| Gb_29851 | No alias | U-box domain-containing protein 21 OS=Arabidopsis... | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os01g64570.1 | PUB23, LOC_Os01g64570 | E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os02g34410.1 | PUB25, LOC_Os02g34410 | U-box domain-containing protein 25 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os03g13740.1 | LOC_Os03g13740 | U-box domain-containing protein 20 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os04g34030.1 | PUB23, LOC_Os04g34030 | E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os04g34140.1 | PUB29, ATPUB29,... | E3 ubiquitin ligase (PUB) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os04g49970.1 | PUB23, LOC_Os04g49970 | E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os04g58920.1 | PUB23, LOC_Os04g58920 | E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os06g13870.1 | LOC_Os06g13870 | U-box domain-containing protein 21 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os12g06410.1 | PUB24, LOC_Os12g06410 | E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| Len_g01213 | PUB25 | U-Box-group-III E3 ubiquitin ligase & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Len_g01810 | PUB25 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Len_g09678 | PUB25 | E3 ubiquitin ligase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Len_g31416 | PUB23 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g24284 | PUB25 | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| MA_10425865g0010 | PUB25 | U-box domain-containing protein 25 OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
| MA_10433846g0010 | PUB23 | E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| MA_126399g0010 | PUB26 | U-box domain-containing protein 25 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| MA_1663g0020 | PUB25 | U-box domain-containing protein 25 OS=Arabidopsis... | 0.06 | OrthoFinder output from all 47 species | |
| MA_17715g0010 | CMPG1, ATCMPG1 | U-box domain-containing protein 20 OS=Arabidopsis... | 0.05 | OrthoFinder output from all 47 species | |
| MA_5536318g0010 | No alias | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| MA_84154g0010 | PUB25 | U-box domain-containing protein 25 OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
| Mp3g22740.1 | PUB23 | E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g11599 | PUB23 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g25038 | PUB26 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g25593 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Msp_g35056 | PUB26 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g38744 | PUB26 | U-Box-group-III E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g09512 | PUB29, ATPUB29 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g29886 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g11257 | PUB26 | E3 ubiquitin ligase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g34239 | No alias | E3 ubiquitin ligase & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Pnu_g12004 | PUB26 | U-Box-group-III E3 ubiquitin ligase & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| Pnu_g27483 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g32476 | PUB25 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g42738 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0005.g002717 | PUB26 | not classified & original description: CDS=1-1404 | 0.05 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0148.g023196 | PUB26 | not classified & original description: CDS=1-1080 | 0.03 | OrthoFinder output from all 47 species | |
| Smo414754 | PUB25 | U-box domain-containing protein 75 OS=Oryza sativa... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc01g007010.2.1 | PUB22, Solyc01g007010 | E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc01g007020.4.1 | PUB23, Solyc01g007020 | E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc01g007040.4.1 | PUB22, Solyc01g007040 | E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc01g007050.3.1 | PUB24, Solyc01g007050 | E3 ubiquitin-protein ligase PUB24 OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc01g107980.3.1 | PUB26, Solyc01g107980 | U-box domain-containing protein 25 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc04g071030.1.1 | Solyc04g071030 | E3 ubiquitin ligase (PUB) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc05g056500.1.1 | PUB26, Solyc05g056500 | U-box domain-containing protein 26 OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc06g074140.1.1 | PUB24, Solyc06g074140 | E3 ubiquitin-protein ligase PUB24 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc11g005700.1.1 | CMPG2, ATCMPG2,... | E3 ubiquitin ligase (PUB) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc11g068940.1.1 | PUB24, Solyc11g068940 | E3 ubiquitin-protein ligase PUB24 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g00706 | PUB23 | E3 ubiquitin ligase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g03410 | PUB26 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g57248 | PUB29, ATPUB29 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g08092 | PUB25 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g15093 | PUB26 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e002598_P001 | Zm00001e002598 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e008167_P001 | PUB23, Zm00001e008167 | E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e014752_P001 | PUB23, Zm00001e014752 | E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e015763_P001 | Zm00001e015763 | U-box domain-containing protein 21 OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e039417_P001 | PUB23, Zm00001e039417 | E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... | 0.05 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEA | Interproscan |
| BP | GO:0016567 | protein ubiquitination | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR003613 | Ubox_domain | 117 | 189 |
| No external refs found! |