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  5. MA_10432772g0010

MA_10432772g0010


Description : Pentatricopeptide repeat-containing protein At3g22470, mitochondrial OS=Arabidopsis thaliana (sp|q6nq83|pp247_arath : 166.0)


Gene families : OG0005897 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005897_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10432772g0010

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00017p00176770 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At1g62930,... 0.03 OrthoFinder output from all 47 species
MA_10433091g0010 EMB2279, EMB88 Pentatricopeptide repeat-containing protein At1g62930,... 0.07 OrthoFinder output from all 47 species
MA_122851g0010 No alias Pentatricopeptide repeat-containing protein At1g12775,... 0.14 OrthoFinder output from all 47 species
MA_89072g0010 No alias Pentatricopeptide repeat-containing protein At3g22470,... 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 119 150
IPR002885 Pentatricopeptide_repeat 67 95
IPR002885 Pentatricopeptide_repeat 226 275
IPR002885 Pentatricopeptide_repeat 156 205
No external refs found!