AMTR_s00061p00037320 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00061.15

Description : Cytoskeleton.microtubular network.microtubule Tubulin heterodimer formation.gamma-Tubulin ring complex (gamma-TuRC).Augmin gamma-TuRC recruiting complex.EDE1 accessory component


Gene families : OG_01_0000642 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000642_tree ,
OG_02_0000381 (LandPlants) Phylogenetic Tree(s): OG_02_0000381_tree ,
OG_03_0000548 (SeedPlants) Phylogenetic Tree(s): OG_03_0000548_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00061p00037320
Cluster HCCA: Cluster_145

Target Alias Description ECC score Gene Family Method Actions
AT2G24070 QWRF4 Family of unknown function (DUF566) 0.02 Archaeplastida
GSVIVT01009361001 No alias QWRF motif-containing protein 2 OS=Arabidopsis thaliana 0.05 Archaeplastida
GSVIVT01037854001 No alias Protein SNOWY COTYLEDON 3 OS=Arabidopsis thaliana 0.05 Archaeplastida
LOC_Os09g11440.2 No alias Protein ENDOSPERM DEFECTIVE 1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_100179g0010 No alias QWRF motif-containing protein 2 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_46842g0010 No alias no hits & (original description: none) 0.07 Archaeplastida
MA_866921g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Pp3c23_22010V3.1 No alias Family of unknown function (DUF566) 0.05 Archaeplastida
Pp3c24_20700V3.1 No alias Family of unknown function (DUF566) 0.02 Archaeplastida
Pp3c8_24940V3.1 No alias Family of unknown function (DUF566) 0.03 Archaeplastida
Solyc01g096840.3.1 No alias accessory component EDE1 of Augmin gamma-TuRC recruiting complex 0.1 Archaeplastida
Zm00001e005768_P003 No alias QWRF motif-containing protein 2 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e016106_P002 No alias AUGMIN subunit 8 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e018954_P001 No alias Protein ENDOSPERM DEFECTIVE 1 OS=Arabidopsis thaliana... 0.11 Archaeplastida
Zm00001e022159_P001 No alias QWRF motif-containing protein 4 OS=Arabidopsis thaliana... 0.02 Archaeplastida
AMTR_s00137p00052220 evm_27.TU.AmTr_v1... Cytoskeleton.microtubular network.microtubule Tubulin... 0.03 LandPlants
AT2G24070 QWRF4 Family of unknown function (DUF566) 0.02 LandPlants
GSVIVT01009361001 No alias QWRF motif-containing protein 2 OS=Arabidopsis thaliana 0.03 LandPlants
GSVIVT01037854001 No alias Protein SNOWY COTYLEDON 3 OS=Arabidopsis thaliana 0.03 LandPlants
MA_100179g0010 No alias QWRF motif-containing protein 2 OS=Arabidopsis thaliana... 0.02 LandPlants
MA_46842g0010 No alias no hits & (original description: none) 0.03 LandPlants
MA_866921g0010 No alias no hits & (original description: none) 0.03 LandPlants
Pp3c23_22010V3.1 No alias Family of unknown function (DUF566) 0.04 LandPlants
Pp3c24_20700V3.1 No alias Family of unknown function (DUF566) 0.02 LandPlants
Solyc01g096840.3.1 No alias accessory component EDE1 of Augmin gamma-TuRC recruiting complex 0.07 LandPlants
Solyc07g054390.1.1 No alias QWRF motif-containing protein 3 OS=Arabidopsis thaliana... 0.02 LandPlants
Zm00001e005768_P003 No alias QWRF motif-containing protein 2 OS=Arabidopsis thaliana... 0.02 LandPlants
Zm00001e018954_P001 No alias Protein ENDOSPERM DEFECTIVE 1 OS=Arabidopsis thaliana... 0.11 LandPlants
AT2G44190 EDE1, QWRF5 Family of unknown function (DUF566) 0.01 SeedPlants
GSVIVT01009361001 No alias QWRF motif-containing protein 2 OS=Arabidopsis thaliana 0.02 SeedPlants
GSVIVT01037854001 No alias Protein SNOWY COTYLEDON 3 OS=Arabidopsis thaliana 0.03 SeedPlants
MA_46842g0010 No alias no hits & (original description: none) 0.02 SeedPlants
Solyc01g096840.3.1 No alias accessory component EDE1 of Augmin gamma-TuRC recruiting complex 0.07 SeedPlants
Zm00001e018954_P001 No alias Protein ENDOSPERM DEFECTIVE 1 OS=Arabidopsis thaliana... 0.11 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR007573 QWRF 373 613
No external refs found!