MA_10432450g0010


Description : no hits & (original description: none)


Gene families : OG0003935 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003935_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10432450g0010

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00254550 evm_27.TU.AmTr_v1... COP1-interactive protein 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00049p00185400 No alias Vesicle trafficking.SNARE target membrane recognition... 0.03 OrthoFinder output from all 47 species
AT1G24460 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.06 OrthoFinder output from all 47 species
AT4G31570 No alias CONTAINS InterPro DOMAIN/s: Prefoldin... 0.14 OrthoFinder output from all 47 species
Aev_g30321 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g14350 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aob_g22595 No alias vesicle trafficking tethering factor *(TNO1) & original... 0.06 OrthoFinder output from all 47 species
Aspi01Gene59720.t1 Aspi01Gene59720 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0154.g053538 No alias not classified & original description: CDS=266-7378 0.03 OrthoFinder output from all 47 species
Ceric.15G031700.1 Ceric.15G031700 not classified & original description: pacid=50639891... 0.08 OrthoFinder output from all 47 species
Dcu_g08332 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g01716 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01010295001 No alias Vesicle trafficking.SNARE target membrane recognition... 0.1 OrthoFinder output from all 47 species
GSVIVT01033178001 No alias COP1-interactive protein 1 OS=Arabidopsis thaliana 0.07 OrthoFinder output from all 47 species
GSVIVT01033179001 No alias COP1-interactive protein 1 OS=Arabidopsis thaliana 0.13 OrthoFinder output from all 47 species
Gb_07542 No alias COP1-interactive protein 1 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Gb_40009 No alias TNO1 vesicle trafficking tethering factor 0.08 OrthoFinder output from all 47 species
Len_g22993 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g07858 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Mp4g21920.1 No alias no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
Nbi_g24585 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0138.g022514 No alias not classified & original description: CDS=346-8904 0.05 OrthoFinder output from all 47 species
Solyc05g014200.3.1 Solyc05g014200 TNO1 vesicle trafficking tethering factor 0.03 OrthoFinder output from all 47 species
Solyc08g006420.3.1 Solyc08g006420 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e015026_P001 Zm00001e015026 TNO1 vesicle trafficking tethering factor 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030118 clathrin coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030125 clathrin vesicle coat IEP HCCA
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP HCCA
CC GO:0030132 clathrin coat of coated pit IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!