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MA_10432294g0010


Description : DEAD-box ATP-dependent RNA helicase 26 OS=Arabidopsis thaliana (sp|q9fnm7|rh26_arath : 309.0)


Gene families : OG0001618 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001618_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10432294g0010
Cluster HCCA: Cluster_207

Target Alias Description ECC score Gene Family Method Actions
Adi_g113230 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g113790 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0009.g011827 No alias mRNA helicase *(RH31) & original description: CDS=535-2991 0.03 OrthoFinder output from all 47 species
Ceric.27G031600.1 Ceric.27G031600 mRNA helicase *(RH31) & original description:... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020713.11 No alias Probable DEAD-box ATP-dependent RNA helicase 48... 0.01 OrthoFinder output from all 47 species
Dac_g12157 No alias mRNA helicase *(RH31) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g50517 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01019804001 No alias DEAD-box ATP-dependent RNA helicase 48 OS=Oryza sativa... 0.04 OrthoFinder output from all 47 species
Ore_g30280 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g30282 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g09557 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g53381 No alias mRNA helicase *(RH31) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g13628 No alias mRNA helicase *(RH31) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g095740.4.1 Solyc01g095740 DEAD-box ATP-dependent RNA helicase 31 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Tin_g12179 No alias mRNA helicase *(RH31) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e016261_P001 Zm00001e016261 DEAD-box ATP-dependent RNA helicase 48 OS=Oryza sativa... 0.04 OrthoFinder output from all 47 species
Zm00001e037076_P003 Zm00001e037076 DEAD-box ATP-dependent RNA helicase 31 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEP HCCA
CC GO:0008303 caspase complex IEP HCCA
BP GO:0016255 attachment of GPI anchor to protein IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0042765 GPI-anchor transamidase complex IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1905368 peptidase complex IEP HCCA
CC GO:1905369 endopeptidase complex IEP HCCA
InterPro domains Description Start Stop
IPR001650 Helicase_C 206 280
IPR011545 DEAD/DEAH_box_helicase_dom 48 124
No external refs found!