MA_10432169g0010 (PGP11)

Aliases : PGP11

Description : subfamily ABCB transporter

Gene families : OG0000048 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: MA_10432169g0010

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00007p00263610	ABCB19,...	Solute transport.primary active transport.ABC...	0.04	OrthoFinder output from all 47 species
AMTR_s00017p00164980	ATPGP4, PGP4,...	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
AMTR_s00049p00128080	evm_27.TU.AmTr_v1...	Putative multidrug resistance protein OS=Oryza sativa...	0.03	OrthoFinder output from all 47 species
Aev_g30925	PGP3, MDR3	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g16048	ABCB19,...	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Als_g22635	ABCB19,...	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g24610	PGP1, ABCB1, ATPGP1	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g30144	PGP1, ABCB1, ATPGP1	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g33802	No alias	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g09164	PGP11	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g32929	ABCB19,...	subfamily ABCB transporter & original description: none	0.01	OrthoFinder output from all 47 species
Aspi01Gene14156.t1	ABCB19,...	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene15960.t1	Aspi01Gene15960	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene28299.t1	Aspi01Gene28299	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Dac_g45466	PGP11	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Dcu_g25899	ABCB19,...	subfamily ABCB transporter & original description: none	0.05	OrthoFinder output from all 47 species
Dcu_g25900	ABCB19,...	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Dcu_g33169	ABCB19,...	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Dde_g44934	PGP11	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g20264	No alias	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01013125001	PGP2	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
GSVIVT01017696001	PGP11	Solute transport.primary active transport.ABC...	0.05	OrthoFinder output from all 47 species
Gb_38960	PGP11	subfamily ABCB transporter	0.02	OrthoFinder output from all 47 species
Len_g24509	ABCB19,...	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Len_g54677	ABCB19,...	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g10739	ABCB19,...	subfamily ABCB transporter & original description: none	0.01	OrthoFinder output from all 47 species
MA_102299g0010	No alias	Putative multidrug resistance protein OS=Oryza sativa...	0.06	OrthoFinder output from all 47 species
MA_10280832g0010	PGP11	ABC transporter B family member 7 OS=Arabidopsis...	0.04	OrthoFinder output from all 47 species
MA_1824g0020	No alias	subfamily ABCB transporter	0.04	OrthoFinder output from all 47 species
MA_6870g0010	No alias	subfamily ABCB transporter	0.04	OrthoFinder output from all 47 species
MA_9253g0010	No alias	subfamily ABCB transporter	0.06	OrthoFinder output from all 47 species
Mp2g11920.1	ABCB19,...	subfamily ABCB transporter	0.01	OrthoFinder output from all 47 species
Mp3g11830.1	ABCB19,...	auxin efflux transporter (ABCB19). subfamily ABCB transporter	0.01	OrthoFinder output from all 47 species
Mp7g04390.1	ATPGP4, PGP4, ABCB4, MDR4	subfamily ABCB transporter	0.01	OrthoFinder output from all 47 species
Nbi_g02494	PGP2	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Nbi_g32846	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g19207	ABCB19,...	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g35743	No alias	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g38163	PGP1, ABCB1, ATPGP1	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g60074	PGP11	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g65660	ABCB19,...	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g25857	PGP2	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g30303	PGP11	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Pp3c17_16450V3.1	ABCB19,...	ATP binding cassette subfamily B19	0.01	OrthoFinder output from all 47 species
Ppi_g17653	PGP1, ABCB1, ATPGP1	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g29797	PGP6	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g60298	PGP2	subfamily ABCB transporter & original description: none	0.01	OrthoFinder output from all 47 species
Sacu_v1.1_s0055.g014489	PGP6	subfamily ABCB transporter & original description: CDS=1-4245	0.03	OrthoFinder output from all 47 species
Sam_g03287	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Smo230688	ABCB19,...	Solute transport.primary active transport.ABC...	0.02	OrthoFinder output from all 47 species
Smo408755	No alias	Solute transport.primary active transport.ABC...	0.02	OrthoFinder output from all 47 species
Solyc06g009290.4.1	PGP21, Solyc06g009290	subfamily ABCB transporter	0.02	OrthoFinder output from all 47 species
Spa_g06203	PGP13	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g40340	ABCB19,...	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Tin_g06701	ABCB19,...	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g11197	PGP2	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Tin_g12815	ABCB19,...	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e008749_P001	ABCB19,...	subfamily ABCB transporter	0.04	OrthoFinder output from all 47 species
Zm00001e017014_P001	ALA2, Zm00001e017014	no hits & (original description: none)	0.05	OrthoFinder output from all 47 species
Zm00001e020073_P001	ATPGP4, PGP4,...	subfamily ABCB transporter	0.03	OrthoFinder output from all 47 species
Zm00001e041087_P002	Zm00001e041087	subfamily ABCB transporter	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATP hydrolysis activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140657	ATP-dependent activity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000145	exocyst	IEP	HCCA
BP	GO:0006887	exocytosis	IEP	HCCA
BP	GO:0016192	vesicle-mediated transport	IEP	HCCA
BP	GO:0032940	secretion by cell	IEP	HCCA
CC	GO:0032991	protein-containing complex	IEP	HCCA
BP	GO:0046903	secretion	IEP	HCCA
CC	GO:0099023	vesicle tethering complex	IEP	HCCA
BP	GO:0140352	export from cell	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like_ATP-bd	418	565
IPR011527	ABC1_TM_dom	76	348
IPR011527	ABC1_TM_dom	755	1026
IPR003439	ABC_transporter-like_ATP-bd	1097	1245

External Links

No external refs found!

MA_10432169g0010 (PGP11)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation