LOC_Os06g10580 (Os06g0207700)


Aliases : Os06g0207700

Description : 34.22 transport.cyclic nucleotide or calcium regulated channels cyclic nucleotide-binding transporter 1, member of a family of cyclic nucleotide gated channels. cyclic nucleotide-binding transporter 1 (CNBT1)


Gene families : OG_01_0000081 (Gene family) Phylogenetic Tree(s): OG0000081_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os06g10580
Cluster HCCA cluster: Cluster_209

Target Alias Description ECC score Gene Family Method Actions
AT1G19780 ATCNGC8, CNGC8 cyclic nucleotide gated channel 8 0.02 Gene family
AT2G46430 ATCNGC3, CNGC3, CNGC3.C cyclic nucleotide gated channel 3 0.06 Gene family
AT3G17700 ATCNGC20, CNGC20, CNBT1 cyclic nucleotide-binding transporter 1 0.03 Gene family
AT4G01010 ATCNGC13, CNGC13 cyclic nucleotide-gated channel 13 0.02 Gene family
AT5G57940 CNGC5, ATCNGC5 cyclic nucleotide gated channel 5 0.02 Gene family
GSVIVT01015970001 No alias 34.22 transport.cyclic nucleotide or calcium regulated... 0.02 Gene family
GSVIVT01027087001 No alias 34.22 transport.cyclic nucleotide or calcium regulated... 0.03 Gene family
GSVIVT01028711001 No alias 34.22 transport.cyclic nucleotide or calcium regulated... 0.06 Gene family
GSVIVT01029404001 No alias 34.22 transport.cyclic nucleotide or calcium regulated... 0.03 Gene family
GSVIVT01029407001 No alias 34.22 transport.cyclic nucleotide or calcium regulated... 0.04 Gene family
MA_10425832g0010 No alias 34.22 transport.cyclic nucleotide or calcium regulated... 0.04 Gene family
MA_10435474g0010 No alias 34.22 transport.cyclic nucleotide or calcium regulated... 0.03 Gene family
MA_10437228g0010 No alias 34.22 transport.cyclic nucleotide or calcium regulated... 0.02 Gene family
Solyc02g086990.3.1 Solyc02g086990.3 34.22 transport.cyclic nucleotide or calcium regulated... 0.02 Gene family
Solyc03g007260.3.1 Solyc03g007260.3 34.22 transport.cyclic nucleotide or calcium regulated... 0.03 Gene family
Solyc03g098210.3.1 Solyc03g098210.3 34.22 transport.cyclic nucleotide or calcium regulated... 0.06 Gene family
Solyc05g050350.2.1 Solyc05g050350.2 34.22 transport.cyclic nucleotide or calcium regulated... 0.02 Gene family
Solyc05g050360.3.1 Solyc05g050360.3 34.22 transport.cyclic nucleotide or calcium regulated... 0.04 Gene family
Solyc05g050380.3.1 Solyc05g050380.3 34.22 transport.cyclic nucleotide or calcium regulated... 0.05 Gene family
Solyc06g051920.3.1 Solyc06g051920.3 34.22 transport.cyclic nucleotide or calcium regulated... 0.03 Gene family
Solyc07g006510.3.1 Solyc07g006510.3 34.22 transport.cyclic nucleotide or calcium regulated... 0.02 Gene family
Solyc12g010010.2.1 Solyc12g010010.2 34.22 transport.cyclic nucleotide or calcium regulated... 0.04 Gene family
Zm00001d007925 No alias 34.22 transport.cyclic nucleotide or calcium regulated... 0.03 Gene family
Zm00001d037035 GRMZM2G129375,... 34.22 transport.cyclic nucleotide or calcium regulated... 0.05 Gene family
Zm00001d053401 GRMZM2G148118 34.22 transport.cyclic nucleotide or calcium regulated... 0.03 Gene family
Zm00001d053403 GRMZM2G066269 34.22 transport.cyclic nucleotide or calcium regulated... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEA InterProScan
BP GO:0006811 ion transport IEA InterProScan
CC GO:0016020 membrane IEA InterProScan
BP GO:0055085 transmembrane transport IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR005821 Ion_trans_dom 176 495
No external refs found!